Gene Bcenmc03_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1380 
Symbol 
ID6123058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1525374 
End bp1526723 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content69% 
IMG OID641637956 
Productdi-haem cytochrome c peroxidase 
Protein accessionYP_001764677 
Protein GI170732730 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.925096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.308422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCC TTCTGAAATC CTTCGCGTCC GCGCGATCGC TGATTCCCGC CGCGGCGACG 
CTCGCGATGG TCGGCGCGCT CGCGGCGCTG GCCGGTTGCG ATGCGCAGCC CGGCACGAGT
GCGTCGGCCG CGTCCGTCGT ACCGGCGGCG CAGGCCGCTC CGGCCGCCCC GGCGGTCGCG
CCGGCCAGCC AGCCGCAGAC GCGTGCGCAG GTGTTCGAGG GCGTGAAGCA GATGACGGCG
CTCGGCAAGC AGCTGTTCTT CGATCCGTCG CTGTCCGGGT CCGGCAAGCT CGCTTGCGCG
TCGTGCCACA GCGCCGAACA TGCGTTCGGG CCGCCGAACG CGCTGTCGGT GCAGCTGGGC
GGCGACGACA TGCACCGTAC CGGCTTTCGC GCGGTGCCGT CGCTGAAGTA CCTGCGCGGT
ATCCCGCCGT TCAGCGAGCA CTTCCACGAT TCGCCGGACG AAGGTGACGA AAGCATCGAC
GCGGGGCCGA CCGGCGGGCT GACCTGGGAT GGTCGCGTCG ATACGCGCGG TGCGCAGGCG
CGCATTCCGC TCACGTCGCC GTTCGAGATG AGCAGCTCGC CCGCGCGGGT CGCGAAGGCG
GTTCGCGCCG CGCCGTACGC CGACGCGTTC CGCAAGGCCT TCGGCGACCA GGTGCTCGGC
GACGACCGGG CGACGTTCGA TGCGGTGCTG CGCGCGCTCG ACGCATTCCA GCAGCAGCCG
GCGCTGTTCG ATCCGTACAC GAGCAAATAC GACGCGTATC TGGCCGGCCA CGCGCAGCTC
ACGCCCGCGG AGTTGCACGG CCTGCAGCTG TTCAACGACG AGAAGAAGGG TAACTGCGCG
AGCTGCCACA TCAGCCAGCG CACGCTCGAA GGCGGCCCGC CGCAGTTCAG CGATTTCGGG
CTGATCGCAA TCGCGGTGCC GCGCAACCGT GCGCTGCCGG TCAATCGCGA CCCGCGCTTC
TACGATCTCG GCGCCTGCGG CCCCGAGCGC ACCGACCTGA AGGGGCGCGA CGAGTTCTGC
GGGCTGTTCC GCACGCCGTC GCTGCGCAAC GTCGCGCTGC GCAAGACGTT CTTCCACAAC
GGCGTGTATC ACTCGCTCGA GGACGTGATG CGCTTCTACG TCGAACGCGA CATCCATCCG
GAGAAGTTCT ATCCGGTCGT GCACGGCAAG GTGCAGATCT ACGACGATCT GCCGAAGCGC
TACTGGCCGA ACATCAACCG CGAAGCGCCG TTCGACCGCA AGCGCGGCGA CCAGCCGGCG
CTGAACGCGG CCGAGATCAA GGACGTGATC GCGTTCCTCG GCACGCTGAC TGACGGGTAT
CAGCAAACGG CCGCGTTAGC CAAGCCCTAG
 
Protein sequence
MHTLLKSFAS ARSLIPAAAT LAMVGALAAL AGCDAQPGTS ASAASVVPAA QAAPAAPAVA 
PASQPQTRAQ VFEGVKQMTA LGKQLFFDPS LSGSGKLACA SCHSAEHAFG PPNALSVQLG
GDDMHRTGFR AVPSLKYLRG IPPFSEHFHD SPDEGDESID AGPTGGLTWD GRVDTRGAQA
RIPLTSPFEM SSSPARVAKA VRAAPYADAF RKAFGDQVLG DDRATFDAVL RALDAFQQQP
ALFDPYTSKY DAYLAGHAQL TPAELHGLQL FNDEKKGNCA SCHISQRTLE GGPPQFSDFG
LIAIAVPRNR ALPVNRDPRF YDLGACGPER TDLKGRDEFC GLFRTPSLRN VALRKTFFHN
GVYHSLEDVM RFYVERDIHP EKFYPVVHGK VQIYDDLPKR YWPNINREAP FDRKRGDQPA
LNAAEIKDVI AFLGTLTDGY QQTAALAKP