| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1341 |
|---|
| Symbol | |
|---|
| ID | 6123019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1480382 |
|---|
| End bp | 1481272 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641637917 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001764638 |
|---|
| Protein GI | 170732691 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.545162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0460764 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG AACTGAAAAC CCTCGTCGCC GTCGCCCGGG AAGGTACCTT TGCCGCCGCC
GGCAATCGTA TCGGGCTCAC GCAGGCGGCC GTGAGCGCGC AGATGCAGCG CCTCGAGGCC
GAGCTCGGCT TCGCGCTGTT CGACCGGCAA GGGCGTTCGG CGCGGCTCAA CGAGCGCGGC
CATCACGTGC TCGACCAGGC GCAGGCGCTG ATCGGCCTGT ACGAGAACCT GAGTTCGACC
GCGCCCGGCT CGCCGGCCGC CGTGCGCGTG ACGATCGGCG CGATCGCGTC GGTGCAGAGC
GCGCTGCTGC CGGCCGCGCT GGCCGATTTC CATCGCCGCC AACCCGCGTG CCGCACGCGC
GTGATTCCGG GACTGTCGAT CGAGCTGGTC AACCGGGTCG ACGCGGGAGA GATCGACATG
GCCGCGATCA TCCGGCCGCC GTTCGCGCTG CAGAGCGACC TGCACTGGAC GACGCTCGCG
CGGGAGCCGT TCCGGCTGAT CGTGCCGCGC GGCGTGAAAG GCAAGGACTG GGCTGCGCTG
CTCGCGAACG CGCCGTTCGT GCGCTACGAC CGCGCGTCGT TCGGCGGTCG CCAGGTCGAC
CGATTCCTGC GCAAGATGCA TATCGCGGTG CGCGACACCT GCGAACTCGA CGAGCTCGAC
GCGATCGTCA AGCTGGTCGA GAACGGCGTC GGCGTCGCGA TCGTGCCGCA GACCGCCGCG
TATCGTCGCT GGCCGGCCGG CGTGCGCGCG ATCGACTTCG GGCATCACAC GTTCCACCGC
GACATCGGGC TCGTGCATCG CGCGCGGCGC ACGATGTCGG AGCCCGCGCA AACGCTGGCG
CAACTGATCG AGGCAGCATC GCGGCGGCGT TCACCGCCGC CGGCCGCGTG A
|
|---|
| Protein sequence | MIRELKTLVA VAREGTFAAA GNRIGLTQAA VSAQMQRLEA ELGFALFDRQ GRSARLNERG
HHVLDQAQAL IGLYENLSST APGSPAAVRV TIGAIASVQS ALLPAALADF HRRQPACRTR
VIPGLSIELV NRVDAGEIDM AAIIRPPFAL QSDLHWTTLA REPFRLIVPR GVKGKDWAAL
LANAPFVRYD RASFGGRQVD RFLRKMHIAV RDTCELDELD AIVKLVENGV GVAIVPQTAA
YRRWPAGVRA IDFGHHTFHR DIGLVHRARR TMSEPAQTLA QLIEAASRRR SPPPAA
|
|---|
| |