| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1250 |
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| Symbol | |
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| ID | 6122928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1370680 |
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| End bp | 1371861 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641637824 |
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| Product | PHB de-polymerase domain-containing protein |
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| Protein accession | YP_001764547 |
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| Protein GI | 170732600 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.139371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAT GGCGCGCGGC GACGCGATAC GCGTTCGACG CATGGCCCGC GGCATCGCTG
CCGCACGCCG CGTCGTCGTG CTACGACGAC CTGTTCGAAC CGCTGCTCGG CCCGCAGGCC
GCGCCGCCGG GCTTCGACCT CGCGTGGCCC GCCGTCAGCG AGCAAGTCGT CGCGCACACG
CCGTTTTGCG ACTTGCGGCG CTTCGCGCAC GCCGATGCGC ATCGCACGGT GCTGCTGTGC
GCGCCGCTCG TCGGGCACGC GGCCGTGATG ATGCGGGAAA CCGCCGAAAC GCTGCTCGCC
GATGGCGACG TCTGCGTGAC CGACTGGCGC AATGCGCGCG ACGTGCCGCT CGCGGCAGGC
CGTTTCGGGC TTGACGAATA CGTCGCGATG CTCGACGGCT TCGTCGGCAC CCTCCAGCAC
GACGACCGGC CGCTGCACGT CGTCGCCGTA TGCCAGGCGA CCGTACCGGC GCTCGGCGCA
CTCGCGCTGC GCGCCGCGCG CGGCCTCGCG CCGCCCGCGA GTATCACGCT GGTCGGCGGC
CCGATCGACG CGCGCCTGAA CCCGAGCGCG CTCGGCGCCG CGGCCGCGGC CCATTCGCTC
GACTGGTGCC GGCGCCACTT GATCGACATC GTGCCGCCCG GCTTCGCGGG GCATGGCCGC
CACGTGTTCC CGACCTATCT GCAACAAGGC GAGATCGCGC TGCTGTATCC GCAACGCTTC
CTCGCGCTGA TCGAGACCTA CGCGCTGGCC GCTTCCCGCT TCGACATGGC CGGGCTCGCC
GACGCCCGGC GCGCGCTGCG CGAATACACG GCGCTGCTCG ACATGCCGGC CGACTATTTC
CTCGACACGG TCGACGTCGT GTTTCAGCGC ATGCTGCTCG CGACCGGCGC GTGGCATGTG
CACGGCCGGC GCGTCGACCC GGCCGCGCTG CGCGACGTCG CGCTGCTGAC GGTCGAAGGC
GCCCGCGACG CGGTCACGGG CGCCGGGCAG ACGCATGCGG CGCTCGATCT GTGCAGCGGC
CTCTCGGCCG ACGAGCGCCA TCGCGTCGAT ATCGACGATT GCGATCACTA CGGGCTGTTT
ACGGGGCCAC GCTGGCACGG CAACGTCCAT CCGGCGCTGC AGCGCGTGTT CGCACTGGCG
GAAGCCGGCC GGCCGCGCTC GCGCGGAACC CGGCGGACGT GA
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| Protein sequence | MRAWRAATRY AFDAWPAASL PHAASSCYDD LFEPLLGPQA APPGFDLAWP AVSEQVVAHT
PFCDLRRFAH ADAHRTVLLC APLVGHAAVM MRETAETLLA DGDVCVTDWR NARDVPLAAG
RFGLDEYVAM LDGFVGTLQH DDRPLHVVAV CQATVPALGA LALRAARGLA PPASITLVGG
PIDARLNPSA LGAAAAAHSL DWCRRHLIDI VPPGFAGHGR HVFPTYLQQG EIALLYPQRF
LALIETYALA ASRFDMAGLA DARRALREYT ALLDMPADYF LDTVDVVFQR MLLATGAWHV
HGRRVDPAAL RDVALLTVEG ARDAVTGAGQ THAALDLCSG LSADERHRVD IDDCDHYGLF
TGPRWHGNVH PALQRVFALA EAGRPRSRGT RRT
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