Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1206 |
Symbol | |
ID | 6122884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1325691 |
End bp | 1326593 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641637780 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001764503 |
Protein GI | 170732556 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.177447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCGC TTTCCGGCTC TTCCGCGCCC TCCCCGGCAC CTGTGCCGGC TTCCCTGCCA GCGAAACCTG CCGCCCGGCA CGCGCCGCGG GTCGCCGGTG CACGCGCGAT CGCCGCGCTG CAATGGGGCG TCACGCTGCT GCTGTGCGCG TTCCTGATCG TGCCCGTCGT GATGTCGGTG CTCGCGGGGC TGACCGTCAA CTATTTCCGC GGCCTGTCGA GCGGCCTCAC GCTGCGCTGG CTCGAGCAGG TGTGGCAGCA GTATCACGGC TCGGTCGCGC TGTCGCTCTA CGTCGCGTTC GCGACGCTCG CGATCGTGCT CGCCGTCGGC GTGCCGGCCG GCTATGCGCT CGCGCGCAGC AAGAGCCGCA TCGCGCGGGC GATCGAGGAA GCGCTCGTGC TGCCGGTCGC GCTGCCGGGG CTGGCTTCGG CGCTCGCGCT GCTGGTCGTG TACGGCGGCT TCACCGCGTT CCGGATGAGC CTGTGGTTCA TCGTCGTCGG CCACGTCGTG TTCACGCTGC CATTCATGGT GCGCGCGGTC GCGGCCGTCG CGGCCGGCGC CGACCTGCGC ACGCTCGAGG AAGGCGCGGC GAGCCTCGGC GCATCGTTCG TCACGCGCTT CGTCACGATC GTGCTGCCGA ACCTGCGGCC GGGCATCGTC GCCGGCGCGC TCGCGGTGCT CACGCTGTCG ATCGGCGAAT TCAACCTCAC CTGGATGCTG CATACGCCCG ACACCAAGAC GCTGCCGGTC GGGCTCGCCG ATACGTATGC GTCGCTGCGC CTCGAAGTCG GCAGCGCGTA CACGATCCTG TTCCTGCTGA TGACGCTGCC GCTGCTCGTC GCGATGCAGT GGCTCGGCGT CGATCCGTCC GGTACGCGTG CGCTCAAGAA GCGCCCGCGC TGA
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Protein sequence | MQSLSGSSAP SPAPVPASLP AKPAARHAPR VAGARAIAAL QWGVTLLLCA FLIVPVVMSV LAGLTVNYFR GLSSGLTLRW LEQVWQQYHG SVALSLYVAF ATLAIVLAVG VPAGYALARS KSRIARAIEE ALVLPVALPG LASALALLVV YGGFTAFRMS LWFIVVGHVV FTLPFMVRAV AAVAAGADLR TLEEGAASLG ASFVTRFVTI VLPNLRPGIV AGALAVLTLS IGEFNLTWML HTPDTKTLPV GLADTYASLR LEVGSAYTIL FLLMTLPLLV AMQWLGVDPS GTRALKKRPR
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