Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1171 |
Symbol | |
ID | 6122849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1279859 |
End bp | 1282978 |
Gene Length | 3120 bp |
Protein Length | 1039 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641637745 |
Product | acriflavin resistance protein |
Protein accession | YP_001764468 |
Protein GI | 170732521 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0727301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAT CCCGCCTCTT CATTCTCCGG CCGGTCGGCA CCGCTCTCCT GATGGCGGCG ATCATGCTGG CCGGCCTCGT GGCGCTGCGC TTCCTGCCGC TCGCCGCGCT GCCCGAGGTC GACTACCCGA CGATCCAGGT CCAGACCTTC TACCCGGGCG CGAGCCCGGA AGTGATGACG TCGTCGGTCA CCGCGCCGCT CGAACGCCAG TTCGGGCAGA TGCCGTCGCT GAACCAGATG TCGTCCCAAA GCTCGGCCGG CGCGTCGGTG ATCACGCTGC AGTTCTCGCT CGACCTGCCG CTCGACATCG CCGAACAGGA AGTGCAGGCC GCGATCAACG CGGCCGGCAA CCTGCTGCCG TCCGACCTGC CCGCTCCGCC GATCTACGCG AAGGTGAACC CGGCCGATGC GCCGGTGCTG ACGCTCGCCG TCAAGTCGAA GACGCTGCCG CTCACGCAGG TGCAGGATCT CGCCGACACG CGCCTCGCGA TGAAGATCTC GCAGATCGCC GGCGTCGGCC TCGTCAGCCT GTCGGGCGGC AACCGCCCGG CCGTGCGAAT CCAGGCGAAC CCGACCGCGC TCGCGAAGTA CGGGATGAAC CTCGACGACC TGCGCACGAC GATCTCGAAC CTGAACGTCA ACACGCCGAA GGGCAACTTC GACGGTCCGA CGCGCGCGTA CACGATCAAC GCGAACGACC AGCTGACGAG CGCCGACCAG TACAACAGCG CGGTCGTCGC GTACAAGAAC GGCCGCCCGG TGATGCTGAC CGACGTCGCG ACGGTCGTCG CCGGCTCGGA GAACACCAAG CTCGGCGCGT GGGTGAATTC GGACCCGGCA ATCATCCTGA ATGTGCAGCG CCAGCCGGGC GCGAACGTGA TCGCGACCGT CGACGCGATC AAGGCGCAGT TGCCGAAGCT GCAGGAAACG CTGCCGGCCG CGCTCGACGT CGAGATCGTC ACCGATCGCA CGACGATGAT CCGCGCGGCC GTGCGCGACG TGCAGTTCGA GCTGCTGCTC GCGGTCGGGC TCGTCGTGCT GGTGATGTAC CTGTTCCTCG CGAACGTCTA CGCGACGATC ATCCCGAGCC TGTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCGGTGAT GTACATGGCC GGCTTCTCGC TGAACAACCT GTCGTTGATG GCGCTCACCA TCGCGACCGG CTTCGTCGTC GACGACGCGA TCGTGATGAT CGAGAACATC GCGCGCTACG TCGAGGAAGG CGAATCGGGG CTCGAGGCCG CGCTGAAGGG CTCGCGGCAG ATCGGCTTCA CGATCATCTC GCTGACGGTG TCGCTGATCG CGGTGCTGAT CCCGCTGCTG TTCATGGGCG ACGTGGTCGG GCGCCTCTTC CATGAATTCG CGATCACGCT CGCGGTAACG ATCGTGATCT CGGCGATCGT GTCGCTCACG CTCGTGCCGA TGATGTGCGC GAAGCTGCTG CGCCACTCGC CGCCGCCCGA GAGCCACCGC TTCGAGGCGC GCGTGCACCG CGCGATCGAC TGGGTGATCG CCCGCTACGC GGTCGCGCTC GAATGGGTGC TGAACCGCCA GCGCTCGACG CTCGTCGTCG CGCTGCTGAC GCTCGGGCTG ACCGCCCTGC TCTATGTCTA CGTGCCGAAG GGCTTCTTCC CCGCGCAGGA CACCGGCGTG ATCCAGGCGA TCACGCAGGC GCCGCAGTCG ATCTCGTACG GCGCGATGGC CGAACGCCAG CAAGCGCTCG CGGCCGAGAT CCTGAAGGAT CCGAACGTCG ACAGCCTCAC GTCGTTCATC GGCGTCGACG GCAGCAACAT CACGCTGAAC AGCGGCCGGA TGCTGATCAA CCTGAAGGCG CGCGACGAAC GCGCAGAAAC CGCCGCGCAG ATCATCCGCG ACCTGCAGCA GCGCGTGTCG AACATCACCG GCATTTCGCT GTTCATGCAG CCGGTGCAGG ATCTGACGAT CGACTCGACG GTCAGCCCGA CGCAGTACCA GTTCATGCTG ACGAGCCCGA ACTCGGAAGA ATTCGCGACC TGGGTGCCGA AACTCGTCGC GCGGCTGCAG CAGGAGCCGT CGCTCGCCGA CGTCGCGACC GACCTGCAGA GCAACGGCCA GTCGGTGTAC ATCGAGATCG ACCGCGCGAG CGCCGCGCGT TTCGGCATCA CGCCGGCGAC CGTCGACAAC GCGCTGTACG ACGCATTCGG CCAGCGCATC GTGTCGACGA TCTTCACGCA GTCGAACCAG TACCGCGTGA TTCTCGAATC GGAGCCGAAG GAGCAGCACT ACGCGCAATC GCTGAACGAC ATCTACCTGC CGTCGGCCGG CGGCGGCCAG GTGCCGCTGA CGTCGATCGC GTCGTTCCAC GAGCGGCCGT CGCCGCTGCT GGTCGCGCAC CTGTCGCAGT TCCCGTCGAC GACGATCTCG TTCAACCTCG CGCCGGGCGC GTCGCTCGGC GAGGCCGTCA AGGCAATCGA GGCCGCCGAG AAGGACATCG GGCTGCCCGG CTCGTTCCAG ACGCGCTTCC AGGGCGCGGC GCTCGCGTTC CAGGCGTCGC TGTCGAACCA GCTGTTCCTG ATCCTCGCGG CGGTCGTCAC GATGTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATC CACCCGATCA CGATCCTGTC GACGCTGCCG TCAGCCGGCG TCGGCGCGCT GCTCGCGCTG ATGATCACCG GGCACGACCT CGACATCATC GGGATCATCG GCATCGTGCT GCTGATCGGC ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCCGA ACGCGTCGAA GGCAAGCCGC CGCGCGAGGC GATCTACCAG GCCTGCCTGC TGCGCTTCCG GCCGATCCTG ATGACGACGC TCGCCGCGCT GCTCGGCGCG GTGCCGCTGA TCGTCGGCTC CGGCGCGGGC TCCGAGCTGC GCCAGCCGCT CGGGATCGCG ATCGCCGGCG GCCTGATCGT GTCGCAGGTG CTGACGCTGT TCACGACACC CGTGATCTAC CTCGGCTTCG ATTCGCTCGC GCGCCGCGTC CGCGGCTGGT TCGAGCGGCA CGGGCCGGGC GCCGATGCAG GCAAGCACAC GGGTGCATAA
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Protein sequence | MNPSRLFILR PVGTALLMAA IMLAGLVALR FLPLAALPEV DYPTIQVQTF YPGASPEVMT SSVTAPLERQ FGQMPSLNQM SSQSSAGASV ITLQFSLDLP LDIAEQEVQA AINAAGNLLP SDLPAPPIYA KVNPADAPVL TLAVKSKTLP LTQVQDLADT RLAMKISQIA GVGLVSLSGG NRPAVRIQAN PTALAKYGMN LDDLRTTISN LNVNTPKGNF DGPTRAYTIN ANDQLTSADQ YNSAVVAYKN GRPVMLTDVA TVVAGSENTK LGAWVNSDPA IILNVQRQPG ANVIATVDAI KAQLPKLQET LPAALDVEIV TDRTTMIRAA VRDVQFELLL AVGLVVLVMY LFLANVYATI IPSLSVPLSL IGTLAVMYMA GFSLNNLSLM ALTIATGFVV DDAIVMIENI ARYVEEGESG LEAALKGSRQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAIVSLT LVPMMCAKLL RHSPPPESHR FEARVHRAID WVIARYAVAL EWVLNRQRST LVVALLTLGL TALLYVYVPK GFFPAQDTGV IQAITQAPQS ISYGAMAERQ QALAAEILKD PNVDSLTSFI GVDGSNITLN SGRMLINLKA RDERAETAAQ IIRDLQQRVS NITGISLFMQ PVQDLTIDST VSPTQYQFML TSPNSEEFAT WVPKLVARLQ QEPSLADVAT DLQSNGQSVY IEIDRASAAR FGITPATVDN ALYDAFGQRI VSTIFTQSNQ YRVILESEPK EQHYAQSLND IYLPSAGGGQ VPLTSIASFH ERPSPLLVAH LSQFPSTTIS FNLAPGASLG EAVKAIEAAE KDIGLPGSFQ TRFQGAALAF QASLSNQLFL ILAAVVTMYI VLGVLYESYI HPITILSTLP SAGVGALLAL MITGHDLDII GIIGIVLLIG IVKKNAIMMI DFALEAERVE GKPPREAIYQ ACLLRFRPIL MTTLAALLGA VPLIVGSGAG SELRQPLGIA IAGGLIVSQV LTLFTTPVIY LGFDSLARRV RGWFERHGPG ADAGKHTGA
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