Gene Bcenmc03_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1171 
Symbol 
ID6122849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1279859 
End bp1282978 
Gene Length3120 bp 
Protein Length1039 aa 
Translation table11 
GC content67% 
IMG OID641637745 
Productacriflavin resistance protein 
Protein accessionYP_001764468 
Protein GI170732521 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0727301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT CCCGCCTCTT CATTCTCCGG CCGGTCGGCA CCGCTCTCCT GATGGCGGCG 
ATCATGCTGG CCGGCCTCGT GGCGCTGCGC TTCCTGCCGC TCGCCGCGCT GCCCGAGGTC
GACTACCCGA CGATCCAGGT CCAGACCTTC TACCCGGGCG CGAGCCCGGA AGTGATGACG
TCGTCGGTCA CCGCGCCGCT CGAACGCCAG TTCGGGCAGA TGCCGTCGCT GAACCAGATG
TCGTCCCAAA GCTCGGCCGG CGCGTCGGTG ATCACGCTGC AGTTCTCGCT CGACCTGCCG
CTCGACATCG CCGAACAGGA AGTGCAGGCC GCGATCAACG CGGCCGGCAA CCTGCTGCCG
TCCGACCTGC CCGCTCCGCC GATCTACGCG AAGGTGAACC CGGCCGATGC GCCGGTGCTG
ACGCTCGCCG TCAAGTCGAA GACGCTGCCG CTCACGCAGG TGCAGGATCT CGCCGACACG
CGCCTCGCGA TGAAGATCTC GCAGATCGCC GGCGTCGGCC TCGTCAGCCT GTCGGGCGGC
AACCGCCCGG CCGTGCGAAT CCAGGCGAAC CCGACCGCGC TCGCGAAGTA CGGGATGAAC
CTCGACGACC TGCGCACGAC GATCTCGAAC CTGAACGTCA ACACGCCGAA GGGCAACTTC
GACGGTCCGA CGCGCGCGTA CACGATCAAC GCGAACGACC AGCTGACGAG CGCCGACCAG
TACAACAGCG CGGTCGTCGC GTACAAGAAC GGCCGCCCGG TGATGCTGAC CGACGTCGCG
ACGGTCGTCG CCGGCTCGGA GAACACCAAG CTCGGCGCGT GGGTGAATTC GGACCCGGCA
ATCATCCTGA ATGTGCAGCG CCAGCCGGGC GCGAACGTGA TCGCGACCGT CGACGCGATC
AAGGCGCAGT TGCCGAAGCT GCAGGAAACG CTGCCGGCCG CGCTCGACGT CGAGATCGTC
ACCGATCGCA CGACGATGAT CCGCGCGGCC GTGCGCGACG TGCAGTTCGA GCTGCTGCTC
GCGGTCGGGC TCGTCGTGCT GGTGATGTAC CTGTTCCTCG CGAACGTCTA CGCGACGATC
ATCCCGAGCC TGTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCGGTGAT GTACATGGCC
GGCTTCTCGC TGAACAACCT GTCGTTGATG GCGCTCACCA TCGCGACCGG CTTCGTCGTC
GACGACGCGA TCGTGATGAT CGAGAACATC GCGCGCTACG TCGAGGAAGG CGAATCGGGG
CTCGAGGCCG CGCTGAAGGG CTCGCGGCAG ATCGGCTTCA CGATCATCTC GCTGACGGTG
TCGCTGATCG CGGTGCTGAT CCCGCTGCTG TTCATGGGCG ACGTGGTCGG GCGCCTCTTC
CATGAATTCG CGATCACGCT CGCGGTAACG ATCGTGATCT CGGCGATCGT GTCGCTCACG
CTCGTGCCGA TGATGTGCGC GAAGCTGCTG CGCCACTCGC CGCCGCCCGA GAGCCACCGC
TTCGAGGCGC GCGTGCACCG CGCGATCGAC TGGGTGATCG CCCGCTACGC GGTCGCGCTC
GAATGGGTGC TGAACCGCCA GCGCTCGACG CTCGTCGTCG CGCTGCTGAC GCTCGGGCTG
ACCGCCCTGC TCTATGTCTA CGTGCCGAAG GGCTTCTTCC CCGCGCAGGA CACCGGCGTG
ATCCAGGCGA TCACGCAGGC GCCGCAGTCG ATCTCGTACG GCGCGATGGC CGAACGCCAG
CAAGCGCTCG CGGCCGAGAT CCTGAAGGAT CCGAACGTCG ACAGCCTCAC GTCGTTCATC
GGCGTCGACG GCAGCAACAT CACGCTGAAC AGCGGCCGGA TGCTGATCAA CCTGAAGGCG
CGCGACGAAC GCGCAGAAAC CGCCGCGCAG ATCATCCGCG ACCTGCAGCA GCGCGTGTCG
AACATCACCG GCATTTCGCT GTTCATGCAG CCGGTGCAGG ATCTGACGAT CGACTCGACG
GTCAGCCCGA CGCAGTACCA GTTCATGCTG ACGAGCCCGA ACTCGGAAGA ATTCGCGACC
TGGGTGCCGA AACTCGTCGC GCGGCTGCAG CAGGAGCCGT CGCTCGCCGA CGTCGCGACC
GACCTGCAGA GCAACGGCCA GTCGGTGTAC ATCGAGATCG ACCGCGCGAG CGCCGCGCGT
TTCGGCATCA CGCCGGCGAC CGTCGACAAC GCGCTGTACG ACGCATTCGG CCAGCGCATC
GTGTCGACGA TCTTCACGCA GTCGAACCAG TACCGCGTGA TTCTCGAATC GGAGCCGAAG
GAGCAGCACT ACGCGCAATC GCTGAACGAC ATCTACCTGC CGTCGGCCGG CGGCGGCCAG
GTGCCGCTGA CGTCGATCGC GTCGTTCCAC GAGCGGCCGT CGCCGCTGCT GGTCGCGCAC
CTGTCGCAGT TCCCGTCGAC GACGATCTCG TTCAACCTCG CGCCGGGCGC GTCGCTCGGC
GAGGCCGTCA AGGCAATCGA GGCCGCCGAG AAGGACATCG GGCTGCCCGG CTCGTTCCAG
ACGCGCTTCC AGGGCGCGGC GCTCGCGTTC CAGGCGTCGC TGTCGAACCA GCTGTTCCTG
ATCCTCGCGG CGGTCGTCAC GATGTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATC
CACCCGATCA CGATCCTGTC GACGCTGCCG TCAGCCGGCG TCGGCGCGCT GCTCGCGCTG
ATGATCACCG GGCACGACCT CGACATCATC GGGATCATCG GCATCGTGCT GCTGATCGGC
ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCCGA ACGCGTCGAA
GGCAAGCCGC CGCGCGAGGC GATCTACCAG GCCTGCCTGC TGCGCTTCCG GCCGATCCTG
ATGACGACGC TCGCCGCGCT GCTCGGCGCG GTGCCGCTGA TCGTCGGCTC CGGCGCGGGC
TCCGAGCTGC GCCAGCCGCT CGGGATCGCG ATCGCCGGCG GCCTGATCGT GTCGCAGGTG
CTGACGCTGT TCACGACACC CGTGATCTAC CTCGGCTTCG ATTCGCTCGC GCGCCGCGTC
CGCGGCTGGT TCGAGCGGCA CGGGCCGGGC GCCGATGCAG GCAAGCACAC GGGTGCATAA
 
Protein sequence
MNPSRLFILR PVGTALLMAA IMLAGLVALR FLPLAALPEV DYPTIQVQTF YPGASPEVMT 
SSVTAPLERQ FGQMPSLNQM SSQSSAGASV ITLQFSLDLP LDIAEQEVQA AINAAGNLLP
SDLPAPPIYA KVNPADAPVL TLAVKSKTLP LTQVQDLADT RLAMKISQIA GVGLVSLSGG
NRPAVRIQAN PTALAKYGMN LDDLRTTISN LNVNTPKGNF DGPTRAYTIN ANDQLTSADQ
YNSAVVAYKN GRPVMLTDVA TVVAGSENTK LGAWVNSDPA IILNVQRQPG ANVIATVDAI
KAQLPKLQET LPAALDVEIV TDRTTMIRAA VRDVQFELLL AVGLVVLVMY LFLANVYATI
IPSLSVPLSL IGTLAVMYMA GFSLNNLSLM ALTIATGFVV DDAIVMIENI ARYVEEGESG
LEAALKGSRQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAIVSLT
LVPMMCAKLL RHSPPPESHR FEARVHRAID WVIARYAVAL EWVLNRQRST LVVALLTLGL
TALLYVYVPK GFFPAQDTGV IQAITQAPQS ISYGAMAERQ QALAAEILKD PNVDSLTSFI
GVDGSNITLN SGRMLINLKA RDERAETAAQ IIRDLQQRVS NITGISLFMQ PVQDLTIDST
VSPTQYQFML TSPNSEEFAT WVPKLVARLQ QEPSLADVAT DLQSNGQSVY IEIDRASAAR
FGITPATVDN ALYDAFGQRI VSTIFTQSNQ YRVILESEPK EQHYAQSLND IYLPSAGGGQ
VPLTSIASFH ERPSPLLVAH LSQFPSTTIS FNLAPGASLG EAVKAIEAAE KDIGLPGSFQ
TRFQGAALAF QASLSNQLFL ILAAVVTMYI VLGVLYESYI HPITILSTLP SAGVGALLAL
MITGHDLDII GIIGIVLLIG IVKKNAIMMI DFALEAERVE GKPPREAIYQ ACLLRFRPIL
MTTLAALLGA VPLIVGSGAG SELRQPLGIA IAGGLIVSQV LTLFTTPVIY LGFDSLARRV
RGWFERHGPG ADAGKHTGA