Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1062 |
Symbol | |
ID | 6122742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1167597 |
End bp | 1168586 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641637634 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001764361 |
Protein GI | 170732414 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000558591 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.288694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGA TCCTGGTCGC GCGTCCGATC TTTCCGGACG TGATCGAACG GCTCAAGCAG TATTTCGACG TCGACTGGAA CGACGGCGAC GCGCTCGCGC CCGACGCGCT CGCCGCGCGT CTGGCCGACA AGGACGGCGC GCTGACGGCC GGCGATCCGG TCGGCGCGGC CACGCTCGCG GCGGCGCCGC GCCTGCGGGT CGTGGCGAAC ATGGCGGTCG GCTACAACAA CTTCGACATG GCTGCGTTCA ACGCGGCGAA CGTGCTCGGC ACCAACACGC CCGACGTGCT GAACGAGTCG ACCGCCGATT TCGGCTGGGC GCTGATGATG GCCGCCGCGC GCCGGATCGC CGAATCCGAA CACTGGCTGC GCGCCGGTCA CTGGCAGAAG TGGGCGTACG ACGGCTTTCT CGGCACCGAC ATCCATGGCT CGACGCTCGG CGTGATCGGG ATGGGCCGTA TCGGCCAGGC GCTCGCGCGC CGCGCGCGCG GCTTCGGGAT GCAGGTGATC TATCACAACC GGTCGCGGGT CGCGCCCGAG ATCGAAGCCG AACTGAATGC CGAATACGTG TCGAAGGATG CGCTGCTCGC GCGCGCCGAT CATGTCGTGC TCGTGCTGCC GTACACCAAG GAGAACCATC ACACGATCGG CGCGGCCGAG CTCGCGAAGA TGAAACCCAC GGCGACGCTG ACCAATATCG CGCGCGGCGG GATCGTCGAC GATGCGGCGT TGGCCGTCGC GCTGCGCGAC GGGACGATCG CCGCAGCCGG CCTCGACGTG TACGAGGGCG AGCCGAGCGT GCATCCGGCG CTGCTCGAGG TGCCGAACGT CGTGCTGACG CCGCATATCG CGAGCGCGAC CGAAAAGACC CGCCGCGCGA TGGCGAATCT CGCTGCCGAC AACCTGATCG CCGCGCTCGG CGAGGGGCCG CGTGCGGGGC AGCCGCCGAA TCCGATCAAC CCTGACGTGA TCGGGAAGCC GCGCGCATGA
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Protein sequence | MQKILVARPI FPDVIERLKQ YFDVDWNDGD ALAPDALAAR LADKDGALTA GDPVGAATLA AAPRLRVVAN MAVGYNNFDM AAFNAANVLG TNTPDVLNES TADFGWALMM AAARRIAESE HWLRAGHWQK WAYDGFLGTD IHGSTLGVIG MGRIGQALAR RARGFGMQVI YHNRSRVAPE IEAELNAEYV SKDALLARAD HVVLVLPYTK ENHHTIGAAE LAKMKPTATL TNIARGGIVD DAALAVALRD GTIAAAGLDV YEGEPSVHPA LLEVPNVVLT PHIASATEKT RRAMANLAAD NLIAALGEGP RAGQPPNPIN PDVIGKPRA
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