Gene Bcenmc03_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0728 
Symbol 
ID6122409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp804279 
End bp804956 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID641637291 
ProductHAD family hydrolase 
Protein accessionYP_001764028 
Protein GI170732081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.844244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATC TGGCACTCTT TGACCTCGAT CACACGCTGA TCCCGACCGA TAGCGACCAC 
GAATGGGGTC GCTTCATGGT GAAGCTCGGC ATCGTCGACG CGGAAAGCTT CTCGCGTCAG
AACGACCAGT TCTTCGCCGA CTACAAGGCC GGGCAGCTCG ACATCCACGC GTACCTGTGC
GCGATGCTCA CGCCGCTCGC GAAGTATTCG CGCGCGCAGC TGGCCGAATG GCACGAGCAG
TACATGCACG AGGTGATCCG GCCGGCGATG ACGCCCGCCG CGCTCGAACT GGTACGCAAG
CACCTCGATG CGGGCGACCT GTGCTGCGTC GTGACGGCGA CCAACGAATT CATCACGCGC
CCGATCGCGA CCGCGTTCGG CGTCGACACG CTGATCGCGT GCGAGGTCGA AACGACCGAC
GGGCATCCCG ATTCGCCGTA CACGGGCCGG CCGACCGGCA CGCCGAGCTA TCGCGAAGGC
AAGATCGTGC GCACCGAAGC GTGGCTCGCG TCGCTCGGCA AGCATTGGGA CGACTTCGAA
CACAGCTATT TCTACAGCGA CTCGCACAAC GACATCCCGC TGCTCGAGAA AGTCACCGAC
CCGATCGCGA CCAACCCTGA CGACACGCTG CGCGCGCATG CAAGCAACCG CGGCTGGCGT
ATCCTCGATC TCTTCTGA
 
Protein sequence
MTNLALFDLD HTLIPTDSDH EWGRFMVKLG IVDAESFSRQ NDQFFADYKA GQLDIHAYLC 
AMLTPLAKYS RAQLAEWHEQ YMHEVIRPAM TPAALELVRK HLDAGDLCCV VTATNEFITR
PIATAFGVDT LIACEVETTD GHPDSPYTGR PTGTPSYREG KIVRTEAWLA SLGKHWDDFE
HSYFYSDSHN DIPLLEKVTD PIATNPDDTL RAHASNRGWR ILDLF