| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0259 |
|---|
| Symbol | |
|---|
| ID | 6121942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 288032 |
|---|
| End bp | 289114 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641636807 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_001763561 |
|---|
| Protein GI | 170731614 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTC GCTCGTTTTC CACGCCCTTT TCCGAACGCT TCGGCCTGCG TCTGCCGCTC
GTGCAGGCGC CGATGGTCGG CGCGACCACG ACCGCGATGG CCGCCGCCGC ATCGAATGCC
GGTGCGCTCG GCAGCTTTGG CGCCGGCGCG CTCGCGCCCG AGCGTATCGA GGCCGAAGTC
GCCGCGATCC GCGCGGCGAC CGATCGCCCG TTCGCGATCA ACCTGTTCGT GTTGCCCGAT
GACGCCGCGC CGGACGCGGC GACCGTCGCG CGCGCACTCG CGGCGATCGA CCCGCTGAAC
GCCGCGCTCG GCCTGCCGCC GGGCACGGCG CCCGCGCGCT ACGCGCCCGA TTTCCGCGCG
CAGCTCGATG CACTCGTCGC GCTGCGCGTG CCGGTCGCGA GCTTCACGTT CGGCGTGCTC
GACGCGGCCG ACGTCGCCCG CCTGAAAGCC GCCGGCACCT ATGTGATCGG CACCGCGACG
CACGTCGCCG AAGGGCTCGC GTGGCAGGCG GCCGGCGCCG ATGCGATCTC CGCGCAGGGC
GCCGAGGCCG GCGGCCATCG CGGCACCTTC ATCGGTTCCG CCGAGGACGC GCTGATCGGC
ACGTTCGCGC TCGTCCCGCA GCTCGTCGAC GCGACCGGCC TGCCCGTGCT GGCCGCGGGC
GGCATCATGG ACGGCCGCGG TATCGCGGCC GCACTGGCGC TCGGCGCGCA GGGCGCGCAG
CTCGGCACCG CGTTCCTCAC GTGCGCGGAA AGCGCGATCG CCGCGGACTG GAAGGCTCGC
CTGCTCGTGA GCGCCGACAC GTCGACGCAG GTCACGCGCG CGATCACCGG CCGTCATGCA
CGCGGGCTGC GCAATACGCT GATGGCGCGG CTCGGCGAGC ACGTGGCCGA CGTCCCGCCG
TATCCGGTGC AGAACGCGCT GACCCAGCCG TTGCGCCAGG CCGCCGCGCG CGCGAACGAT
GGCGACTACC TGTCGCTGTG GGCCGGCCAG GGCGCGCCGC TCGCGCGGCG GCGCGGCGAT
GCGTTGACGA CGTCGCAACT GGTCGCCGCG CTCGATGCGG AATGGCGCGC ATCGGCTGCT
TGA
|
|---|
| Protein sequence | MSVRSFSTPF SERFGLRLPL VQAPMVGATT TAMAAAASNA GALGSFGAGA LAPERIEAEV
AAIRAATDRP FAINLFVLPD DAAPDAATVA RALAAIDPLN AALGLPPGTA PARYAPDFRA
QLDALVALRV PVASFTFGVL DAADVARLKA AGTYVIGTAT HVAEGLAWQA AGADAISAQG
AEAGGHRGTF IGSAEDALIG TFALVPQLVD ATGLPVLAAG GIMDGRGIAA ALALGAQGAQ
LGTAFLTCAE SAIAADWKAR LLVSADTSTQ VTRAITGRHA RGLRNTLMAR LGEHVADVPP
YPVQNALTQP LRQAAARAND GDYLSLWAGQ GAPLARRRGD ALTTSQLVAA LDAEWRASAA
|
|---|
| |