| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0190 |
|---|
| Symbol | |
|---|
| ID | 6121873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 215712 |
|---|
| End bp | 217421 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641636738 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763492 |
|---|
| Protein GI | 170731545 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.872884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAA ACCTCATCTA CATCACGGAC GCCGGCCGCG CCGCACTGGT GGCGCCCGGC
AACACCGGGA CCACTGCGCG CGAGGTCACG CAGATTGGCC TCGCCACAGC GACGTTCGTG
TTCAAGCCGG AAATGACCGC GCTGCCGAGC GAGCTGAAGC GCATCACGAC GTTCGGCGGC
GATACCGTTG CGAAGGACAC GATTCACATC GTGATCCAGG ACGACAGCGC GGACCAGTAC
ACGCTGTATG GCTTCGGGCT GTACCTGGAC AACGGCGTGC TGTTCGGCGT CTACGTGCAG
AACGATCCGA TCCTCGAAAA AGCGTCGGCG TCGATGCTGC TACTGGCCGC CGATACCGTG
TTTGCCTCGA TCGATGTGTC GAAGCTGGTT TTCGGACCGA CGTCGTTCCT CAATCCGCCG
GCGACCACCG ACCGTAAGGG CGTCGTCGAG CTGGCGACGC AGGCAGAGGT CGACGCCGGC
GCTGATGACA CGCGTGCCGT GACGCCGAAG ACCGCAGCCG CGCGGTATGC GCCGCTCGCC
AGCCCCGCAA TCACCGGTTC GGCGACCATC ACGTCCGCGC CTGGCGATGC CGATGCGCAG
CTCGCAATCA AGGGCCAGGC CGGCGCGCTG AACCGGGAGG CGAAGTTGCG CCTCTACGGC
ACCTTCGGCT CGTCGAACAT CGACACCAGT ACTCGCCTCA TCGCATCCAT CCGCGCGGCA
TTTACTGGCG GCGCCTGGGG CCGGGAGTCA GTCGGGTTCT GGATCAACGA CGGCACGGCG
AACGACGCCG CGAGCGACGC GAAGCAAAAG CGCGTGATGA ATCTGACGGC GACCGGGGTT
CAGATCGACG GCGGCCTGAG CACGACCGCA CGACCGACGT GGGCCGGTGC GACGCCGTGG
GACAGCGCGA ACGTCACGCC TCTCGACAAG AACGCCGGAG GCCAGGTCAA CGCAACCGTG
ACGCTGTACG GAGCCGGTGA CTACGGATCG CAGCTCGTCT TCAACTCGAA CGGGTATACG
CCGCGGGTTC AGGTGCAGGC GTCGACGGCG ACGTGGATGG TAACGAACGG CGCGAATACG
GCCGCGAACC TATCGGTCAC CAATGGCGGC ACGGTCATCG CACGCGGCGA GTTAAAGGCC
GGTGGCGGTA CGTCGCAGCT CGCGCCGGAC GGAAACCTGA ACGGGAGCCT GTGGGGCGGA
TGGCTCTCTA ACTTCCTGCC GAACAATTAC GTCAACCGCG CCGGGAGCAC GATGTGGGGC
CGCATGTCAT TCACGCGTGA TGGATGGCAA GCCGATATCG GGCTGCGCAA CAACCGGCCC
GGTTTCGATT CGTGGACTTA TCTGCGTGCT CGCGACAACG GCGGCATCGA AGTCATCAAC
TCGGCCTACA ACTCGGTGAC GTGGGGCGTC GACGACTGGG GCACGATGTA CATGCGCGGC
CAGCAGGTCC TCAATACGGA CGGCAATCTG TTCTGCGCGT ATCGCGGCGC GTGGATGAAC
ACCATCCTCG ACGACCTGTA CAACCGCGAC AACTCGAAGG CCAACGCCGG GGCGCGCGTG
CAGTGGGATT CCGGCGTGAA CAATTTCGGC ACCATCGATC GCCTCAACGG CGCACTGCCC
GCACCGTGGG TCGTGTGCGG CCTGAGCGGT CCGGGCAACG GCACAGCCAA CGCGATCGTT
GTCTACGGCG TAGTTTTGAG GAACCAATGA
|
|---|
| Protein sequence | MAGNLIYITD AGRAALVAPG NTGTTAREVT QIGLATATFV FKPEMTALPS ELKRITTFGG
DTVAKDTIHI VIQDDSADQY TLYGFGLYLD NGVLFGVYVQ NDPILEKASA SMLLLAADTV
FASIDVSKLV FGPTSFLNPP ATTDRKGVVE LATQAEVDAG ADDTRAVTPK TAAARYAPLA
SPAITGSATI TSAPGDADAQ LAIKGQAGAL NREAKLRLYG TFGSSNIDTS TRLIASIRAA
FTGGAWGRES VGFWINDGTA NDAASDAKQK RVMNLTATGV QIDGGLSTTA RPTWAGATPW
DSANVTPLDK NAGGQVNATV TLYGAGDYGS QLVFNSNGYT PRVQVQASTA TWMVTNGANT
AANLSVTNGG TVIARGELKA GGGTSQLAPD GNLNGSLWGG WLSNFLPNNY VNRAGSTMWG
RMSFTRDGWQ ADIGLRNNRP GFDSWTYLRA RDNGGIEVIN SAYNSVTWGV DDWGTMYMRG
QQVLNTDGNL FCAYRGAWMN TILDDLYNRD NSKANAGARV QWDSGVNNFG TIDRLNGALP
APWVVCGLSG PGNGTANAIV VYGVVLRNQ
|
|---|
| |