| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0081 |
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| Symbol | |
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| ID | 6121764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 92911 |
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| End bp | 95253 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641636628 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001763383 |
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| Protein GI | 170731436 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAA ATCGCTTCGT TATGCGGCGT ATCGCCACGA CCCTGCTCGT GGCAGGCATC
ATCGTCTCGC AGGCCGCCTA CGCTCAGGTC ACGCTCAACT TCGTGAATGC GGATATCGAC
CAGGTCGCGA AAGCGATCGG CGCCGCGACC GGCAAGACCA TCATCGTCGA CCCCCGTGTG
AAGGGGCAGC TCAATCTCGT GGCCGAACGG CCGGTGCCGG AAGACCAGGC ATTGAAGACG
CTGCAGTCGG CGCTGCGCAT GCAGGGCTTC GCGCTCGTGC AGGATCACGG CGTGCTGAAG
GTCGTGCCGG AAGCCGACGC GAAGCTGCAG GGCGTGCCGA CCTACATCGG CAATGCGCCG
CAGGCGCGCG GCGACCAGGT GATCACGCAG GTGTTCGAGC TGCACAACGA ATCGGCGAAC
AACCTGCTGC CGGTGCTGCG GCCGCTGATC TCGCCGAACA ACACGGTGAC GGCCTACCCG
GCGAACAACA CGATCGTCGT GACCGACTAT GCGGACAACG TGCGCCGCAT CGCGCAGATC
ATCTCGGGCG TCGACAGCGC CGCGGGCGCG CAGGTGCAGG TCGTGCCGCT GCGCAACGCG
AACGCGATCG ACCTCGCCGC GCAACTGCAG AAAATGCTCG ACCCGGGCGC GATCGGCAAC
AGCGACGCGA CGCTGAAGGT ATCGGTCACG GCCGACCCGC GCACCAACGC GCTGCTGCTG
CGTGCGTCGA ACGCGTCGCG CCTCGCGGCC GCGAAGCGCC TCGTGCAGCA GCTCGACGCG
CCGAGCGCGG TGCCCGGCAA CATGCACGTC GTGCCGCTGC GCAACGCCGA TGCGGTGAAG
CTCGCGAAGA CGCTGCGCGG GATGCTCGGC AAGGGCGGCA ACGACAGCGG CTCGTCGGCG
TCGTCCAACG ATGCGAACAG CTTCAACCAG AACGGCGGCT CGTCGTCGAG CGGCAACTTT
TCGACCGGCA CGTCGGGCAC CCCGCCGCTG CCGTCGGGCG GCCTGGGCGG TTCGTCGTCG
TCGTCGGCGT ATGGCGGTTC GTCCGGCAGC GGCGGACTTG GCACGGGTGG CCTGCTCGGC
GGCGACAAGG ACAAGAGCGG TGACGACAAC CAGCCGGGCG GGATGATCCA GGCCGACTCG
GCCACCAACT CGCTGATCAT CACCGCATCC GATCCGGTTT ACCGGAACCT GCGCTCGGTG
ATCGACCAAC TCGATGCGCG GCGTGCGCAG GTCTACATCG AAGCGCTGAT CGTCGAGCTG
AACTCGACGA CGCAGGGCAA CCTCGGCATC CAGTGGCAGG TCGCGAGCGG CCAGTTCCTC
GGCGGCACGA ACCTGAATCC CGGGCTGGGC CTCGGCAACA GCATCATCAA CCTGACGGCC
GGTGGGGTGG CCAACGCCGC CGGCGGGATC ACCGGCGGCG GACTGGCCTC CAACCTCGGG
CAGTTGTCCC AGGGGCTGAA CATCGGCTGG CTGCACAACA TGTTCGGCGT GCAGGGGCTC
GGCGCGCTGC TGCAGTACTT CGCGGGCGTG AGCGACGCGA ACGTGCTGTC GACGCCGAAC
CTGATCACGC TCGACAACGA GGAAGCGAAG ATCGTCGTCG GCCAGAACGT GCCGATCGCG
ACCGGCTCGT ATTCGAACCT GACGAGCGGC ACGACCAGCA ACGCGTTCAA TACCTACGAC
CGTCGCGACG TCGGCCTGAC GCTGCACGTG AAGCCGCAGA TCACCGACGG CGGGATCCTG
AAGCTGCAGC TCTACACCGA GGATTCGGCG GTCGTCAGCG GCACCACCAA CGCGCAGACC
GGCCCGACCT TCACGAAGCG CTCGATCCAG TCGACGATCC TGGCCGACAA CGGCGAGATC
ATCGTGCTCG GCGGCTTGAT GCAGGACAAC TACCAGGTGT CGAACAGCAA GGTGCCGCTG
CTCGGCGACA TTCCGTGGAT CGGCCAGCTG TTCCGTTCGG AATCGAAGGT GCGCGCGAAA
ACCAACCTGA TGGTGTTCCT GCGCCCGGTG ATCATTTCCG ATCGCAGCAC CGCGCAGGAA
GTCACCGCGA ACCGCTACGA CTACATCCAG GGCGTGACGG GCGCGTACAA GTCGGACAAC
AACGTGATCC GCGACAAGGA CGATCCGGTC GTCCCGCCGA TGCCGCTCGG CCCGAGCCAG
GGTGGCACGC CGGCCGGCAA CCTGTTCGAT CTCGACAAGA TGCGTCGCCA GCAGTTGCAG
CGCCAGGTGG TGCCCGTGCC GGCCCAGCCG TTGCCGGAAG CGACGCCCGC GCAGCCGCAG
GGCGTGCCGC AGCAGGCGGT GCCGCAACAG CCGCTGACCA CCGCGCCGGG AGCCTCGCAG
TGA
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| Protein sequence | MTRNRFVMRR IATTLLVAGI IVSQAAYAQV TLNFVNADID QVAKAIGAAT GKTIIVDPRV
KGQLNLVAER PVPEDQALKT LQSALRMQGF ALVQDHGVLK VVPEADAKLQ GVPTYIGNAP
QARGDQVITQ VFELHNESAN NLLPVLRPLI SPNNTVTAYP ANNTIVVTDY ADNVRRIAQI
ISGVDSAAGA QVQVVPLRNA NAIDLAAQLQ KMLDPGAIGN SDATLKVSVT ADPRTNALLL
RASNASRLAA AKRLVQQLDA PSAVPGNMHV VPLRNADAVK LAKTLRGMLG KGGNDSGSSA
SSNDANSFNQ NGGSSSSGNF STGTSGTPPL PSGGLGGSSS SSAYGGSSGS GGLGTGGLLG
GDKDKSGDDN QPGGMIQADS ATNSLIITAS DPVYRNLRSV IDQLDARRAQ VYIEALIVEL
NSTTQGNLGI QWQVASGQFL GGTNLNPGLG LGNSIINLTA GGVANAAGGI TGGGLASNLG
QLSQGLNIGW LHNMFGVQGL GALLQYFAGV SDANVLSTPN LITLDNEEAK IVVGQNVPIA
TGSYSNLTSG TTSNAFNTYD RRDVGLTLHV KPQITDGGIL KLQLYTEDSA VVSGTTNAQT
GPTFTKRSIQ STILADNGEI IVLGGLMQDN YQVSNSKVPL LGDIPWIGQL FRSESKVRAK
TNLMVFLRPV IISDRSTAQE VTANRYDYIQ GVTGAYKSDN NVIRDKDDPV VPPMPLGPSQ
GGTPAGNLFD LDKMRRQQLQ RQVVPVPAQP LPEATPAQPQ GVPQQAVPQQ PLTTAPGASQ
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