Gene Bcen_6520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6520 
Symbol 
ID4096488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1164145 
End bp1165002 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID638019805 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_626352 
Protein GI107029257 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACA CCACCGCGCG CGGCGACGCG CTCGCGTCGC ACCCGCCCGC TTCGCCGCCT 
CCTGGAGCCC GACGTGATCC GCTGCGCGCG TGGCGAATCG CTGGCCTCGC ACTGCCGTTC
GCCGCGCTCG TGCTGCTGGA GATCGTGGTG CGGCGCGGCT GGCTGCCCGA TCATCTCGTG
CCGGCGCCGA GCGAGATTCT CGATACGCTG GCGCGGATGG GCGTCATCCG GGTCGCACGT
CACGTCGGCG CGAGCACGCT GCGCGTCGCG GCCGGGTTTG CGGCCGGCGC CGGGCTCGCG
CTCGTCGTCG GCGCGGCGAT GGGCCTGAGC CGCCGGATCG ACGCGCTGTT CGAACCGACG
TTCCAGGCAC TGCGCGCGAT TCCGTCGCTT GCGTGGGTGC CGGTGCTGCT GCTGTGGCTC
GGCATCGATG AAGCACCGAA AATCACGCTG ATCGCGATCG GCGCGTTCTT TCCGGTTCAC
CTCGCGGTGG TCGCCGGCAT TCGCGACGTC GACCGCAAGC TCGTCGAGCT CGGCGCGGTG
TACCGGCTCG GCCCGCTCGC GCTGTTCCGC CGCATCCTGC TGCCGGCCGC GCTGCCGCAG
ATCGTCACCG GCCTGCGCAC CGGCCTCAGT CTCGCGTGGA TGTTCATGGT CGCCGCGGAA
CTGATCGCGG CCACGCGCGG CCTCGGCTTC CTGCTGAGCG ACGGTCGCGA AACCGGGCGG
CCCGATCTCG TGTTCGGCGC GATCCTGCTG CTCGCGTTGC TCGGCAAGCT GACCGACGGC
GCGATGCGCC GCATCGAGTC GCGCTGGCTC GGCTGGCGCG ACGCGTTCGA TGGCGCATCG
CGCGAGGGCA GGAAATGA
 
Protein sequence
MTDTTARGDA LASHPPASPP PGARRDPLRA WRIAGLALPF AALVLLEIVV RRGWLPDHLV 
PAPSEILDTL ARMGVIRVAR HVGASTLRVA AGFAAGAGLA LVVGAAMGLS RRIDALFEPT
FQALRAIPSL AWVPVLLLWL GIDEAPKITL IAIGAFFPVH LAVVAGIRDV DRKLVELGAV
YRLGPLALFR RILLPAALPQ IVTGLRTGLS LAWMFMVAAE LIAATRGLGF LLSDGRETGR
PDLVFGAILL LALLGKLTDG AMRRIESRWL GWRDAFDGAS REGRK