Gene Bcen_6431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6431 
Symbol 
ID4096399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1056362 
End bp1057870 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content68% 
IMG OID638019718 
Productdiguanylate cyclase 
Protein accessionYP_626265 
Protein GI107029170 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCAT TCACTTCGAT CGAGAAAATC GCCGACTGGG CCGGACGCCA CCCGTTCGTC 
GTCGGCGCGT TGGGCACGCT GATGTCGCTG GCGGCACTCG GGATCAGCGC GGTGACGCTG
TGGGTCGCGC GCAGCGAAGT CATCGAGCAC GCGCATGAGA CGTCGCGCAA CGTCGCGGCC
GTCCTGGCGA GTCAGATCGC GAGGACGGTC GAAACGTCGA ACAACGCGCT GGTCGCGTTG
GCCGCCGATC TCGGCAAGCC GGCGGTACAG CGGATGGACG TCGGGTTGCG GCACGACCTG
CTGTTCGAGC GCACCGCGGC GCAATACATG ACCGGCATGG GCGTGACCGA CCGGCGCGGC
CGCCTCATTG ACGGGTGCTG CAGCACGACC CATCGCTGGG ACTTCGCCGA TCGCGACTAC
TTCAAGGTCC ATCGCGATGC GGACAACGTC GGGCTCTACG TCTCCCAGCC CTATCGCGCG
CGCTCGCGCG GCGGCAAGGA ATCCATCGCG CTGTCGCGGC GCATCGAGCG GCCGGATCAT
ACGTTCGACG GGATCGCGGT CGTCGCCGTC GATCTCGCTT ACTTCGAGCA GTTGCTGTCC
CGCCTCGATG TCGGGCCGAA CGGCGTCAGC GCGATCGTGC GCGCGGACGG CACGATCCTC
GCGAGAAACC CGTCGTTGAA CGACGGCCAG ATGAACCTCC TGCGCCGCTC GAAATCCTTC
CAGCGGATGG TGAACAGCGA ATCGGGCTTC TATCCCGCGC GTTCGAGCAT CGACGGCATC
GTGCGGCTGT ACACCTACCA GCGGATACCG GGCACCCCGC TGATCGCGGT CGTCGCGCCG
GCCGAAAACG ACGTGCTGGC CGGCATTCGG CGCCTGTCGT GGACGGTCGG CGTGTCGGCG
TCCGTGATCG GCGCGTCGTT CTGCGCGGTG GTCTGGCTGC TGGCCTTCGC GTTGCGCGAC
AACTTCCGCA AGCAGACGCT GCTCACCGAT CTCACGCGTA CCGATCCGTT GACCGGATTG
CGCAATCGTC GCGCGCTCGA TACCGCACTG GCCGACGAAT GGGAGCGGCT GCAGCGCGGC
AGCGGCGGCA GCCTGTCGGT GCTGTTCATC GACGCCGATC ACTTCAAGCA GTACAACGAC
CAGCACGGGC ACGCGCAGGG CGACACCGCG CTGCGTTTTC TCGCCGAATG CATCCGCGCG
CATACGCGGC GGCGCGGCGA CCTCGCTGCG CGCTACGGCG GCGAGGAATT CGTCGCGGTG
TTGCCGGATA CGGACGAAAA CGGCGCCGCG CAGGTCGCCG AAGCGATTCG CCGGGAAGTC
GAAGGCAACC GGCTCGTCGG GTTTGCGGAA ACCGTGCCGC CTTTCACCGT CAGCATCGGC
TGTGCGACCG GTCGGCGCGC GCGGCACGCG TCCATGCTCG CGCTGTCGCA CCAGGCGGAC
ATGGCGCTCT ACCGCGCGAA GCGCGAAGGC AGGAACCGCG TGTGTTGCGC GCAGCCGGAC
GCGGTGTGA
 
Protein sequence
MPAFTSIEKI ADWAGRHPFV VGALGTLMSL AALGISAVTL WVARSEVIEH AHETSRNVAA 
VLASQIARTV ETSNNALVAL AADLGKPAVQ RMDVGLRHDL LFERTAAQYM TGMGVTDRRG
RLIDGCCSTT HRWDFADRDY FKVHRDADNV GLYVSQPYRA RSRGGKESIA LSRRIERPDH
TFDGIAVVAV DLAYFEQLLS RLDVGPNGVS AIVRADGTIL ARNPSLNDGQ MNLLRRSKSF
QRMVNSESGF YPARSSIDGI VRLYTYQRIP GTPLIAVVAP AENDVLAGIR RLSWTVGVSA
SVIGASFCAV VWLLAFALRD NFRKQTLLTD LTRTDPLTGL RNRRALDTAL ADEWERLQRG
SGGSLSVLFI DADHFKQYND QHGHAQGDTA LRFLAECIRA HTRRRGDLAA RYGGEEFVAV
LPDTDENGAA QVAEAIRREV EGNRLVGFAE TVPPFTVSIG CATGRRARHA SMLALSHQAD
MALYRAKREG RNRVCCAQPD AV