Gene Bcen_6426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6426 
Symbol 
ID4096394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1050410 
End bp1051309 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID638019713 
ProductLysR family transcriptional regulator 
Protein accessionYP_626260 
Protein GI107029165 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTC CGCCGCTCAA GGCCATCATC GCGTTCGAAA GCGTCGCCCG GACCAAAAGC 
GTCAACCGCG CGGCGGAAGA GCTCGGCCTG ACCGCGTCCG CCGTCAGTCA CCAGCTCAGC
AACCTCGAAG CGCAGATCGG TCAACCGCTG TTTCAGCGCT CGGGGCGCGG CCTCGTCCTC
ACGCCGACCG GCGAACGCTA CCTGGCCGAC GTCACCGGCT CGCTGGCCGA CCTCAGCCGC
GCGACCGAGC GCGCGTCGAG CCGCACCGAA GTCGATATCC TGCGCGTGCA TTCGAGCCCG
AGCTTCGGGC TGATGTGGCT GCTGCCGCGG CTGTCGTCGT TTCAGGAGGC GAACGGCGAT
ATCCAGCTGA ACCTCGCGTG CTCGTACGAA AACGTGTCGT TCTCGAACGG CTTCTACGAT
ATCGACGTCC GGCACGGCTA CGGCAACTGG GACAACCTCG AGGTGAAGAC GGTGCGCGGC
GAGTTCATCG CGCCGCTCGC GTCGCCGCAG TACCTCGAGC GGCATCCGGT GCGCGCGCCG
GAAGACCTGC TCGCCCATCG TCTGATCTAT TCCGAAACGC CGCTGGTCCA GTGGAAGCAG
TGGTTCGGCC GCACCGGCGT GCCGCTGGCG GCGCAGAAAA CCTTCGACTT CTCGTTCGAC
CGCTCGTACA TGTCGCTCGA AACCGCCGCG CTCGGCCTCG GCATCGCGCT CGAAAGCCTG
ATGCTCGCGT CGGTGAAGAT CCGTCAAGGG CTGCTGGTGC CGGTGTTCGG CGAGCGCCAT
GCGGTCGAAG TCGGTGCTCA TCATCTCGTT TACCCGCGGC AGAACGCGGA ATTGCCGCGC
GTGAAGCGCT TCCTGGCGTG GATCGAGCGG GAAGTCGCCG CTCATCGGCA AGCGGGTTGA
 
Protein sequence
MRIPPLKAII AFESVARTKS VNRAAEELGL TASAVSHQLS NLEAQIGQPL FQRSGRGLVL 
TPTGERYLAD VTGSLADLSR ATERASSRTE VDILRVHSSP SFGLMWLLPR LSSFQEANGD
IQLNLACSYE NVSFSNGFYD IDVRHGYGNW DNLEVKTVRG EFIAPLASPQ YLERHPVRAP
EDLLAHRLIY SETPLVQWKQ WFGRTGVPLA AQKTFDFSFD RSYMSLETAA LGLGIALESL
MLASVKIRQG LLVPVFGERH AVEVGAHHLV YPRQNAELPR VKRFLAWIER EVAAHRQAG