Gene Bcen_6397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6397 
Symbol 
ID4096482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1024670 
End bp1025632 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content66% 
IMG OID638019685 
ProductLysR family transcriptional regulator 
Protein accessionYP_626232 
Protein GI107029137 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTC GTCAGGTCGA TCTGAATCTG CTGAAAGTGT TCGATGCGCT GCTGAAAAAG 
CGCCATGTGA CGCAGGCGGG CGTCAGCATC GGGCTCAGCC AGCCGGCGAT GAGCTATGCG
TTGTCGAAGC TGCGCGAGCT GTTCGAGGAC CCGCTGTTCG TGCGCACGGG CCGCGGCATG
GAGCCGACGC CGCGCGCGCA GGCGCTCGGC GAGCCGGTCG CGCGGCTACT GGATCTGGTG
CAGACCGAAA TCCTGCCGAT GCCCGAGTTT CGCCCGGCCG AGTCGTCGCG CAACTTCGTG
CTGTGCATGT CGGACATCGG CGAAATGGTG TTCCTGCCCC GCCTGGAGAG CTTTCTCGAC
AAGGCCGCGC CGCACGTGAG CATCAAGACG GTCGCGCTCA GCATGCCGGA GCTGGAGGAG
GGGCTGGCGA GCGGCGACGT CGACCTCGCG ATCGGCTACT TTCCGGGGTT GAACAGCGAA
TCGCTGAAGC GCAAGGCGCT GTACCGGCAT TCGTATGTGT GTATCGCCCG CGACGATCAT
CCGGAAATCG GGGACACGCT GTCGCTCGAT CAGTACCGCG CCGCCGCGCA TGTGATGGTG
CATCCCGAAG GCCGCGAGCA GGACGTGCTC GCCCGCACGC ACGAGCGCCT CGGGATTCGC
GTCAACGTCC GCTTCAGTAC GCCGCGCTTC ATCGGCGTGC CGTTCGTCGT CGCCGGGTCG
GACATGATCG CGGCGGTGCC GCAGGCCGTC GGGCGGCGCT TCGCGGAGTT CGTGAACGTC
AAGCTGCTGC CGCTGCCCTT CCCCGCCCCC ACGTACGAGC TTTATCTGCA CTGGCATCCG
CGCTTTCATC ACGAGCCGGC CAACCGCTGG ATTCGCGACG CGATGAGCGA ACTCGTCAAG
GGGCCGATGC AGCACGAGCC GTTGCCGAAT ACGAAGCGGA AGCGTTCGGC GGCGGCGCGG
TAG
 
Protein sequence
MDIRQVDLNL LKVFDALLKK RHVTQAGVSI GLSQPAMSYA LSKLRELFED PLFVRTGRGM 
EPTPRAQALG EPVARLLDLV QTEILPMPEF RPAESSRNFV LCMSDIGEMV FLPRLESFLD
KAAPHVSIKT VALSMPELEE GLASGDVDLA IGYFPGLNSE SLKRKALYRH SYVCIARDDH
PEIGDTLSLD QYRAAAHVMV HPEGREQDVL ARTHERLGIR VNVRFSTPRF IGVPFVVAGS
DMIAAVPQAV GRRFAEFVNV KLLPLPFPAP TYELYLHWHP RFHHEPANRW IRDAMSELVK
GPMQHEPLPN TKRKRSAAAR