Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6307 |
Symbol | |
ID | 4096950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 920447 |
End bp | 922744 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019596 |
Product | AsmA |
Protein accession | YP_626143 |
Protein GI | 107029048 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.726183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTAA CCCGAGCCAT CGGCAAATCG GCTGCATGGA TCGTCGGTAT CGTCGCGGTG CTCATCGCGG CGGCCGGCAT CTTTATCTTC ACGTTCGACT GGAACCGCGC GAAACCGTGG GTCAACGAAC AGGTGAGTAC CGCGCTCGGC CGCCCGTTCG CGATCAACGG CGATCTCAAG GTCGGCTGGC GTCGTCCCGA TGGCGAGACC GGCTGGCGTG CATGGGTGCC CTGGCCGAGC TTCTCCGCCA CGCAACTCGA GATCGGCAAT CCCGACTGGG CGCAGGCGCC CAAGTTCGTC ACGCTCGATG CCGCGCACTT CGATCTCGCG CTCCTGCCGC TGCTGGCGCA TGAAATCGTC ATCCCGTCGA TCGACGTCGT GAATCCTGCC GTCGATCTCG AACGGCGCGC GGACGGCAGC AATACGTGGA CCTTCCAGTT CAAGCAATCG TCGCAGCCTT CGCGGTGGAA GGTGCGGCTC GACAGCTTCG GTTTCGCGAA GGGCACCGTC ACGTATCGCG ATGCGATCAC GAAGGCCGAC CTGACCGTCG CGATCGATAC GCTCGGGCAG CCGATTCCGC TCGGCGACGT GCTGAAGGAG CAGGAGCAGA CCTCGCGTGC GGCGTCGGCG CAGCGCGTCG GCAAGCATGG CGCCGCGCAA CTGGGCGCGA AGGCCGATGC GCAAGCCGCG TCGGGCGAGT CGGGGGCGAG TGCGGTCGCG GCCTCGGGTG CGTCGGCTGC GAGCGGCGTT GCTTCGGCTG CGTCAGGTTC GTCCGGTTCA TCCGCTTCGT CCGCGCCTTC CGCGTCGGCG GCCGCTGCCG CGTCCGGCGC GAGCGGCGCC GCGGCGCCCG CGAAGCCGTC CGGCCCCACC TACGCGTTCG GGCTGAAGGT CGACGGCCGC TACAAGAACG TGCCGATCAG CGGCACCGGC AAGGTCGGCG GCGTGCTCGC GATCCAGGAT ACGTCGCAGC CGTTCCCGCT GCAGGCCGAC GTGAAGGCGG GCGATACGCG GCTCGCGATT GTCGGCACGC TGACCGATCC GAGGCATCTC GCGGCGCTCG ACCTGCGGCT GTGGCTGCAG GGCACGTCGA TGTCGCACCT TTACCAGCTC ACCGGCATCA CGCTGCCCGA TACGCCGCCT TACGCGACCG AAGGGCGCTT GATCGGCAAC TTCAAGCCGA ATGCGAGCAC CTTCCGCTAC GAGAACTTCA ACGGTCGCGT CGGCGGCAGC GATCTCGGCG GCACGCTCAC CTGGGCGCAG CGCGAGCCGC GGCCGAAGCT GTCGGGCGAA CTCGTGTCGA ACCTGCTGCA GTTCTCCGAT CTCGCGCCGG TGATCGGCGC CGACTCGGCC GCGAGCAAGA AGAAGCGCGG CGACACGACG CGCCAGCCGC CCGACCGCGT GCTGCCGGTC GCGGCGTTCC GCACCGAACG GTGGAGCGCG ATCGATGCAG ACGTGAAGTT CACCGGCCGC AAGCTGATCA AGAGCGCGGA CCTGCCGATC ACCAACCTGT ACACGCACAT TCTGATGCAG GACGGCGTGC TGACGCTGGA GCCGCTGCAG TTCGGCGTCG CGGGCGGCAC GCTCGCGACG AATGCGCATC TCGACGGCAG CCGCACGCCG CTCAAGGGCC GCTTCACGCT GGCCGCGCGG CATCTGAAGC TCAAGCAGCT GTTCCCGACG CAGAAGGTGA TGCAGTCGGC GTTCGGCGAA ATCAACGGCG ACGCGTCGCT GTCGGCAACG GGCAATTCGC CGGCCGCGCT CGCGGCGACG TCGACCGGCG AAGTGAAGGC GCTCATCACC AACGGTCGCA TCAGCCGCCT GCTGATGGAG GCCGCGGGGT TGAACGTCGC GAACGTCGTC TACGAGAAAC TGTTCGGCAA CCGCGACGTC AACATCAATT GCGCGGCGAT CGATTTCGTC GCGACCGACG GCATGCTCGA CCCGAAGGTC TTCGCGCTCG ATACCGACGA CGCGCTCATC AACGTCGACG GCCCGATCAA CCTGCGCGAC GAATCGCTCG ACCTGAAGAT CCATCCGCAC ACGAAGGGCT TCCGGATCTT CTCGCTGCGC TCGCCGTTGT ATGCGAAGGG CACGTTCAAG AACCCGAAGG TCGGCGTCGA TGCGGGCGCG CTCGCGCTGC GCGCCGGCGC GATGGTCGGG CTCGGGCTGA TCAACCCGTT CGCGGCGCTG ATCCCGCTGA TCGCGCCGAG CAACAACCGC GACGTGCCGT GCTCGGAACT GTTCGGGCAG ATGAAGGCGC AGGCGGCGCA GAAAGCGGCC AAGAAGGCCG GCAAGTGA
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Protein sequence | MTLTRAIGKS AAWIVGIVAV LIAAAGIFIF TFDWNRAKPW VNEQVSTALG RPFAINGDLK VGWRRPDGET GWRAWVPWPS FSATQLEIGN PDWAQAPKFV TLDAAHFDLA LLPLLAHEIV IPSIDVVNPA VDLERRADGS NTWTFQFKQS SQPSRWKVRL DSFGFAKGTV TYRDAITKAD LTVAIDTLGQ PIPLGDVLKE QEQTSRAASA QRVGKHGAAQ LGAKADAQAA SGESGASAVA ASGASAASGV ASAASGSSGS SASSAPSASA AAAASGASGA AAPAKPSGPT YAFGLKVDGR YKNVPISGTG KVGGVLAIQD TSQPFPLQAD VKAGDTRLAI VGTLTDPRHL AALDLRLWLQ GTSMSHLYQL TGITLPDTPP YATEGRLIGN FKPNASTFRY ENFNGRVGGS DLGGTLTWAQ REPRPKLSGE LVSNLLQFSD LAPVIGADSA ASKKKRGDTT RQPPDRVLPV AAFRTERWSA IDADVKFTGR KLIKSADLPI TNLYTHILMQ DGVLTLEPLQ FGVAGGTLAT NAHLDGSRTP LKGRFTLAAR HLKLKQLFPT QKVMQSAFGE INGDASLSAT GNSPAALAAT STGEVKALIT NGRISRLLME AAGLNVANVV YEKLFGNRDV NINCAAIDFV ATDGMLDPKV FALDTDDALI NVDGPINLRD ESLDLKIHPH TKGFRIFSLR SPLYAKGTFK NPKVGVDAGA LALRAGAMVG LGLINPFAAL IPLIAPSNNR DVPCSELFGQ MKAQAAQKAA KKAGK
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