| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5828 |
|---|
| Symbol | |
|---|
| ID | 4096822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 378906 |
|---|
| End bp | 380222 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638019100 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_625666 |
|---|
| Protein GI | 107028571 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCA AGCCCGCAAG CAAAGGCTCA GACAAACAGG TTTCGCTGTT TCAGACCCCC
GAGCCGCCCG ACTTGCTGCG CAAGGCGGTC CAGGCGATTC ATATCGCGCC GAAGTCCGGC
AAGATCGGTC TGCAGCAGCG CAAGATGTTC AGCTCGCTGA TCAAGAACGC GCTTCGGCAG
GAGGCGTTCG AACCGGGCCG AACGAGCTTC TCGATTTCGA TCGCGTCGCT GTCGCACGAG
AGCGGGCTGA ACAGCAACAA CACGAAGTAC GTGAAGGACA CGGTCAACTC GTTGATCAGT
ACCGTCGTCA ACTGGGACTA CCTGGCCGCG GACCGTTCGA CGGTCTGGAA AGCGTCGGGC
CTGCTCGCCG GCGCGGAGCT CGAGCAATCG GTGCTGAAGT ACAGCTTCTC CGACCAGATT
CGCAGCGAAC TGCTCAATCC CGAAATCTAC GCGCTGATCG ATATGCGGAT CGCCCGCGAG
TTCCGGCGGT CGCATTCGCT CGCGCTGTGG GAAAACACGG TGCGTTACGA GGGGATCGGC
ATCACCGCGA AGATTCCGTT GCCGAAATTC CGTGACCTCA TTCTCGGCCA GGACAAGGCG
TCGCAGTCGT ACAAGGAATA CAAGCTGTTC AAGAGCAAGG TCCTGGTGCC GTGCATCCAG
GAGGTGAACG AAGTATCGGA CCACACGCTC GAGCTGATCG AACACAAATC CGGCCGCAGC
GTGGAAGCCG TGCAGTTCAA GGTGACGCGC AAGCAGAGCA CCGATACGGT CGAAGACGGC
GACGTCAAGA ACGAAGCGCT GGTCGAGGAG GTCGCGAAGT TCGGCATTCC GCGCTCGGAA
GCGCGCCGGT TGATCACGCA ATACGGCGTG CAGCGCATCA AGGCGGCGAT CGCCTATACG
CTCAATCGGA CTACGAAGAA GAATGCGACG CCGGTCGACA ACGTCGCCGC GTACTTCCGC
AAGGCGCTGA CGCACGGCTA CACGTTGGCC GATGGGCAGG GAACCGAGGC GGCTGCACCG
GCGAAGGAAT CCGCGCAGAG TAAGCAGGAA CAGATTCGCG ACAAGTATCT GGCGGCGAAG
GTCGAGGAAG CCGGCGCGTA TTTCCGCGAA CTGGAGATCG ACGACCAGAC CAAGCTGATC
GAGCGTTACA ACGAGACGGT GGCGGGTTCG AAGGACCTGA CGCTGTCGCC GAAGAAGAAG
GCGAGCAAGC TGGCGCAAAC CAGTTTCTTC CGGTGGCTGG CGCTCGATAC GTGGGGCGAG
CCGACCTCGG ACGACCTGCT GGAATTCCTG CTCAAAAGCA GTCTCGCAGG CAACTGA
|
|---|
| Protein sequence | MPRKPASKGS DKQVSLFQTP EPPDLLRKAV QAIHIAPKSG KIGLQQRKMF SSLIKNALRQ
EAFEPGRTSF SISIASLSHE SGLNSNNTKY VKDTVNSLIS TVVNWDYLAA DRSTVWKASG
LLAGAELEQS VLKYSFSDQI RSELLNPEIY ALIDMRIARE FRRSHSLALW ENTVRYEGIG
ITAKIPLPKF RDLILGQDKA SQSYKEYKLF KSKVLVPCIQ EVNEVSDHTL ELIEHKSGRS
VEAVQFKVTR KQSTDTVEDG DVKNEALVEE VAKFGIPRSE ARRLITQYGV QRIKAAIAYT
LNRTTKKNAT PVDNVAAYFR KALTHGYTLA DGQGTEAAAP AKESAQSKQE QIRDKYLAAK
VEEAGAYFRE LEIDDQTKLI ERYNETVAGS KDLTLSPKKK ASKLAQTSFF RWLALDTWGE
PTSDDLLEFL LKSSLAGN
|
|---|
| |