Gene Bcen_5791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5791 
Symbol 
ID4096459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp336518 
End bp337645 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID638019065 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_625631 
Protein GI107028536 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCA TTTCCGCATC GCCGCGCCCG CTCAATCTTC GTGTCGTTAC CGCTTCCCGC 
GACCCCGCAG GCCTTCAAGC CGCGGCGCCC GTGCGCACGC TGCCCGAACG CCACGCGCAG
GCCCGCGCCC AGGCGCAGGT GTTCGCCGAT CCGCGTTCGC TCGCGCTGCT CGAACAGGTT
CGCCGCGTCG CGCCGAGCGA CGCGAACGTG CTGATCGTCG GCGAAACGGG CACCGGCAAG
GAATTGATCG CGCGCCACGT GCATGAGCTC GGCGCCCGTC GCGACGGGCC GTTCGTCGCG
GTGAACTGCG GCGCGTTCTC CGAAACGCTC GTCGACAGCG AACTGTTCGG CCACGAGAAA
GGCGCGTTTA CCGGCGCATT CAGCGCGAAG CCCGGCTGGT TCGAAGCCGC GCACGGCGGC
ACGCTGTTTC TCGATGAAAT CGGCGACCTG CCGCTCGCGA TGCAGGTCAA GCTGCTGCGC
GTGCTGCAGG AGCGCGAGGT CGTGCGGCTC GGTTCGCGCA CCGGGATTCC GGTCGACGTA
CGAGTGGTCG CGGCGACCAA CGTCGACTTG CAGCAGGCGG TCGCGGCCGG GAAGTTTCGT
GGCGACCTGT TCTACCGGCT CAATGTCGTG CAGCTCGCGG TCCCGCCGTT GCGCGACCGC
CCGGGCGACA TCCTGCCGCT CGCGCGCCAC TTCTTCGACA TTTACCGCGA CCGGCTCGGC
GGCGGCCCGC GCCGCATCGA TCCACGCGCC GAGCGACGGC TCCAGGCGCA CGGCTGGCCC
GGCAATATCC GCGAACTGGA GAACGTGATC CATCATGCGC TGCTCGTGAG CCGTCACGAC
GTGCTGCAGG ACACCGACCT GCACATCGCG CCGCCGTGTG TGCCGGCCGT GGCCGCGCAG
GCAACCGATT CGTCCGCCGA TGCACAGGCG GCGCTCGAGC ATGCGCTGCG CGACCTGTTC
GACGACGGGC ACGGCAACCT GTTCGAACAC ATCGAGGACA CCGTGATGCG TGTCGCGTTC
GAATTCAGCC ACCGCAACCA GATCCGCACC GCGCAGTTGC TCGGCATCAG CCGCAACGTG
CTGCGCGCCC GGCTGATCCG CGCGAAGGCA ATCACCGCGC TGAAATAG
 
Protein sequence
MTSISASPRP LNLRVVTASR DPAGLQAAAP VRTLPERHAQ ARAQAQVFAD PRSLALLEQV 
RRVAPSDANV LIVGETGTGK ELIARHVHEL GARRDGPFVA VNCGAFSETL VDSELFGHEK
GAFTGAFSAK PGWFEAAHGG TLFLDEIGDL PLAMQVKLLR VLQEREVVRL GSRTGIPVDV
RVVAATNVDL QQAVAAGKFR GDLFYRLNVV QLAVPPLRDR PGDILPLARH FFDIYRDRLG
GGPRRIDPRA ERRLQAHGWP GNIRELENVI HHALLVSRHD VLQDTDLHIA PPCVPAVAAQ
ATDSSADAQA ALEHALRDLF DDGHGNLFEH IEDTVMRVAF EFSHRNQIRT AQLLGISRNV
LRARLIRAKA ITALK