| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5747 |
|---|
| Symbol | |
|---|
| ID | 4096376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 287209 |
|---|
| End bp | 288702 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638019022 |
|---|
| Product | phenylalanine/histidine ammonia-lyase |
|---|
| Protein accession | YP_625588 |
|---|
| Protein GI | 107028493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTAT TCCGTGCGGC GCGGCCGCTC GACTGGCGAC AGGTTGCGGC GGTGGCGGCC
GGCGAGCCGC TGGCATTGGC CGACGAGACG CGCGCGCGGG TCGTGGCCGC TCGCGAACTC
GTCGACGAGA TCGTCGCGCG CGGGATTCGC GCCTACGGTG TCAATACCGG CGTCGGCGCA
CTGTGCGACG TGATCGTGTC GCCGGCCCAG CAGAGCACGC TGTCGCACAA CATCCTGATG
AGTCACGCGG TGGGCGTCGG CATGCCGCTC GGCGCGGCCG AAACGCGCGC GATCATCGCG
GCCGCGATCA ACAACTATGC GCACGGGCAT TCGGGCGTGC GTGCCGACGT CGTCGACCAG
CTCGTCGCGC TGCTCGAGCA CGATTGCCTT CCCGAGGTGC CGGCGCACGG CTCGGTCGGG
TACCTGACCC ACATGGCGCA CGTCGCGCTC GTCTGTGTCG GGCACGGCCA TGCGCGGCAT
CGCGGCGAAC GCATCCGCGG CGACGAGGCG CTGCGGCGCA TCGGCCGCGA ACCGCTGGTT
CTCGGCGCGA AGGAAGGGTT GAGCCTCGTC AACGGGACGC CCTGCGTCAC GGGGCTGGCG
GCGCTTGCGC TGGCCCGCGC GGAACGGTTG CTCGACTGGG CCGACTGGAT CGCGGCGATG
AGCTTCGAGA ACCTCGGCGG GCAACTCGCC GCATTCGATC CGGCTTCGCT CGCGCTGCGG
ATTTCGCCCG GTATCGGGCA GGTCGGCGCC CGTTTGCGTG CGCTGCTGGC GGACAGCGGC
ATGCTTGCCG CGGCGAGCGG CCGGCATACG CAGGACCCGC TCAGCCTGCG CACGATTCCG
CACGTCCATG GAGCGGCGCG CGACGTGTTC GACGTCACGG CGGAGGTTGT CGATCGCGAA
CTCGCATCCG TCACCGACAA TCCGATCGTC GCCGGCACGC GCGACGCGCC GGCCGTGCAT
TCGCAGGCGC ATGCGGTCGG CGCCGGCATC GCGCTCGCGA TGGACAGCCT CGCGAGCGCG
ATGGCGCAGG TCGCGGCGAT CGCCGAGCGG CGTCTCGACC GGCTCGTGAA TCCGCTCGTC
AGCGGGCTGC CGGCGTTTCT TGCCACGCCG GGCGGCAGCT GTTCGGGTTT CATGATCGCG
CAGTACACGG CGGTCGCGCT GGTCGCGCAA AATCAGCGGC TCGCGGCGCC GGCGAGCCTC
GACGGCGGCA TCACGTCGGG GCTGCAGGAA GATCACCTGT GTCATGCGAC GCCGGCCGCG
CTGAAAGCGC TCGACATCAT CGAGAACACG ACGCGCGTGC TCGCGATCGA GCTGCTGGCC
GCCGCGCAGG CGTACGATCT GCAGCCGGGC GAAACGGGGC GCGCCGCATC GACCGACGCG
CTGTGGCGAC ACGTGCGCGA ACGTGCGCCG GCGTATCACG ACGACCGGCC GCTGGCGGAC
GATATCGCGA TCGCGGCCGG CATCGTCGCC GGTGTGCCGC CGTCGTTGCG ATGA
|
|---|
| Protein sequence | MTVFRAARPL DWRQVAAVAA GEPLALADET RARVVAAREL VDEIVARGIR AYGVNTGVGA
LCDVIVSPAQ QSTLSHNILM SHAVGVGMPL GAAETRAIIA AAINNYAHGH SGVRADVVDQ
LVALLEHDCL PEVPAHGSVG YLTHMAHVAL VCVGHGHARH RGERIRGDEA LRRIGREPLV
LGAKEGLSLV NGTPCVTGLA ALALARAERL LDWADWIAAM SFENLGGQLA AFDPASLALR
ISPGIGQVGA RLRALLADSG MLAAASGRHT QDPLSLRTIP HVHGAARDVF DVTAEVVDRE
LASVTDNPIV AGTRDAPAVH SQAHAVGAGI ALAMDSLASA MAQVAAIAER RLDRLVNPLV
SGLPAFLATP GGSCSGFMIA QYTAVALVAQ NQRLAAPASL DGGITSGLQE DHLCHATPAA
LKALDIIENT TRVLAIELLA AAQAYDLQPG ETGRAASTDA LWRHVRERAP AYHDDRPLAD
DIAIAAGIVA GVPPSLR
|
|---|
| |