Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5649 |
Symbol | |
ID | 4096588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 183015 |
End bp | 184610 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638018925 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_625491 |
Protein GI | 107028396 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain [TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0472962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCAT TGATCAGCAT CGCCGACCTG CTCGAACACG GCGCCGAGCG CTGGCCGCAT CATCCGGCGT ATGCCGACGG CGGCGGCACC CTGACTTACG ATCAGCTCGC CCGCGCGGTC CGGCGCGCCG CCGCCGTGCT CGCGGCGCGC GGCGTGCAGC CCGGCGAACG CGTCGCGATC TACGCGCCGA AGCGCGTCGA AACCGTGGTC GCGATGCTCG CGGCCAACGC ACTCGGCGCG ATCTTCGTAC CGGTCAATCC GCAGTTGAAG GAAGCGCAGA TCGAACACAT CGTCGCCGAC AGCGGCGCCG CGCTGTTCGT GACCGGCGCG CAGCGGCTCA AGCGCCTGCC GGCGCTCGCC GCGCTCGTCG GCGCGCGCAC GCTGCTGATC GAGGAGCTGG CCGACGCGAT CGAGTCGCCG GGCACCGATA CGCCGGCATC AGCATCGGCA GCGGCAGCGG CCCCCGCCGG CCGCCCGGTC GACGACGATC CGGCCGCGCT GCTCTACACG TCCGGCTCGA CCGGCAAGCC GAAGGGCGTC GTCGTGTCGC ATCGCAACCT GGTGTCCGGC GCGTTCAGCG TCGCGGCGTA CCAGCGGCTC GCCGCCGACG ACGTCGTGCT CGGCGTGCTG CCGCTCAGCT TCGACGCGGG CCTGAGCCAG CTCACGACCG CGCTGGCGTC CGGCGCGTGC TACACGCCGC TCGACTTCCT GCAGCCGGCC GAGGTGCCGC GCCATTGCGA CGCGTTCGGC GTGACGTCGA TCACCGGCGT GCCGCCGCTG TGGATGCAGA TCGCGTCGGC CGGCTGGAGC GACACCGCAC GCACGCGGCT CCGCCGCTTC GCGAACACCG GCGGCCATCT CGCGACGCCG CTGCTGCACC GCCTGCAGGC GCTGTTCACG CAGGCTTCGC CGTACCTGAT GTACGGGCTG ACCGAGGCAT TCCGCTCGAC TTACCTGGCG CCGGCCGACG CGGCGCTGCG CCCGACGTCG ATCGGCAAGG CCGTGCCGAA CGCGGAGATC CTCGTGCTGC GCGCGGACGG CAGCGAATGC GCGGCCGACG AACCCGGCGA GCTCGTGCAC CGCGGCGCGT TCGTCACGCT CGGCTACTGG AACCGGCCCG AGCTGACCGC GCAGCGCTTT CGTCCGCTGC CGCGCCGGCA CGGCGAGATT CCGCGCCCGG ACGTCGCCGT GTGGTCGGGT GACATCGTGC GGCGCGACGC GGACGGCTAC CTGTACTTCG TCGCGCGCGG CGACGACATG ATCAAGACCT CCGGCTATCG CGTGAGCCCG ACCGAGGTCG AGGACGTGCT GTTCGCGCTG CCGCACATCC GCGAGGCCGC GGTATTCAGC GTCCCGCACC CGGCGCTCGG TGAAGCGATC GCCGCGTGCG TCGTGTCGAC GCTCGACGCC GACGCGTGCC GCGCCGACAT CGCCCGCGCA TGCCGCGACG CGTTGCCCAC CTACATGAAC CCGCTCGTCG TCGAGCCCCT GCCGACGTTG CCGCGCAACC CGAACGGCAA GATCGACCGA CCCGCATTGA AAGCGCAGTA TCGCGACGCG TTCGCGCGCC CGAACCTCGA GGAGACCGCA GCATGA
|
Protein sequence | MNALISIADL LEHGAERWPH HPAYADGGGT LTYDQLARAV RRAAAVLAAR GVQPGERVAI YAPKRVETVV AMLAANALGA IFVPVNPQLK EAQIEHIVAD SGAALFVTGA QRLKRLPALA ALVGARTLLI EELADAIESP GTDTPASASA AAAAPAGRPV DDDPAALLYT SGSTGKPKGV VVSHRNLVSG AFSVAAYQRL AADDVVLGVL PLSFDAGLSQ LTTALASGAC YTPLDFLQPA EVPRHCDAFG VTSITGVPPL WMQIASAGWS DTARTRLRRF ANTGGHLATP LLHRLQALFT QASPYLMYGL TEAFRSTYLA PADAALRPTS IGKAVPNAEI LVLRADGSEC AADEPGELVH RGAFVTLGYW NRPELTAQRF RPLPRRHGEI PRPDVAVWSG DIVRRDADGY LYFVARGDDM IKTSGYRVSP TEVEDVLFAL PHIREAAVFS VPHPALGEAI AACVVSTLDA DACRADIARA CRDALPTYMN PLVVEPLPTL PRNPNGKIDR PALKAQYRDA FARPNLEETA A
|
| |