Gene Bcen_5628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5628 
Symbol 
ID4096682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp160772 
End bp161623 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID638018904 
ProductPirin-like 
Protein accessionYP_625470 
Protein GI107028375 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.137693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAATA CCCTCGATTC CGTTCCCTCG ACCACCGTCG CCGGCCGTCA TGTCGTGTTC 
CGCACGCGCG GCCACGCGCA CGGGCCGGTC GTCCGCATGG TCAGCCCGTC CGACGTCGGC
GAGATGATCA AGCCGTTCGT GTTCCTCGAC CTGATCGATA CGCGGGCGCC GCTCGGCAAG
CCGGCCTTCG GCTGGCATCC GCATTCGGGC ATCGCCACGC TGACGCTCAT GATCGACGGG
CACGGCACCT ACGTGGAATC GACGGGCCAC GAAGGCCCGA TGCGGGCCGG CGACATCGAA
TGGATGAGCG CGGGGCGCGG CGTCTGGCAT ACGGGTTCCG TGGTGCCGCC GGTCAAGGCG
TTCCAGCTGT GGGTGGCGTT GCCGCCGGGG CGCGAGCTGG CGCCGGCGTT CAGTCAGCAC
CTGTCGATCG ACGACATCCC GACGGACGGG CCGGCCCGCG TGCTGCTCGG CCGCCACGGC
GACGCGGTCA GCCCGGTCGA TGCGCCGCCC GGCATCAACT ACGTCGTCGT GCAGTTGGCG
GCGGGCGAGC GCTGGACCTG CCGGCCGCCG CAGGGCTACC GGGTCGGCTG GACCGCCGTG
ATGGACGGCC GCCTGCGCAC GCCGGACCCG GTCGGGCGGG GCGAGCTGGT CGTGTTCGAC
GCGTCCGACG CGCCGATCGA ATTCGAGGCC GTGACCGACG CGCGCTTCGT GGTCGGTACC
GCGATTCCGC ATCCGCACGA TCTTCATCTG GGCGCCTACT CGGTGCATAC GAGCGCCGCC
GCGCTGGTGG AAGGCGAGCG CGAAATCGTA CGTGTCGGCC GTGAACTGCG CGCCAAGGGC
GTGATGCGCT GA
 
Protein sequence
MLNTLDSVPS TTVAGRHVVF RTRGHAHGPV VRMVSPSDVG EMIKPFVFLD LIDTRAPLGK 
PAFGWHPHSG IATLTLMIDG HGTYVESTGH EGPMRAGDIE WMSAGRGVWH TGSVVPPVKA
FQLWVALPPG RELAPAFSQH LSIDDIPTDG PARVLLGRHG DAVSPVDAPP GINYVVVQLA
AGERWTCRPP QGYRVGWTAV MDGRLRTPDP VGRGELVVFD ASDAPIEFEA VTDARFVVGT
AIPHPHDLHL GAYSVHTSAA ALVEGEREIV RVGRELRAKG VMR