Gene Bcen_5584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5584 
Symbol 
ID4096772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp104493 
End bp105713 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content67% 
IMG OID638018860 
Productmajor facilitator transporter 
Protein accessionYP_625426 
Protein GI107028331 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGC CGGTTTTTTC CCCTCCCGTC ACGCGGGAAA CCGCGCCACC CCGACGGCGC 
GCGCTGTGGC TATCGTGCGT TGCACACGCC ATGCACGATG GCTACACGGA CATGATCTAC
GCGTTGCTAC CCGTGTGGCA GTCGGAATTC GGGCTCGACT TCGCAGCCCT GGCCATCCTG
CGCGGCGTCT ATGCCGGCAC GATGGCGACG CTGCAGTTGT CCGCCGGGCG TCTCGCGCAA
CGCCTGGGCA GCCGCGCGAC GCTCGCACTC GGTACGCTGC TCGCCGCGCT CGGCTATGCG
CTCGCGGGCA TGTCGGGTGG CCTGCTCGGG TTGGGCGTCG CGCTGGCGAT TTCGGGCGGC
GGCTCCAGCA CGCAGCATCC GATCGCATCG GGCGCCGTCT CCCGCTTCTA TGGGCGCGAC
GCAAGAGGCC CGCTGAGCAT CTACAACTTT TCCGGCGACC TCGGGAAATC GGCGCTGCCG
GCCGCCATTT CGCTGCTCGT GACCCTGATG CCATGGCGTC ATGCGCTATG GATCGTCGCC
GGGCTGGGCT GCGTCGTGGC CGCCGTCATC GCGCTCTGGT TTCCCGCCGT GCCGCGCGGC
GGCGCGAACA CGACGGCGAA AGAGCATGCG TCCGCGCAAC GCGGCGGCAC GGGAAAAAGC
GGATTCTCCG CGCTGTTCTC CATCGGCGTG CTCGATACGG CCGTACGCAT GGGACTGCTT
ACCTTTCTGC CTTTCCTGCT GAAGGCAAAG GGCGTCTCGC CTCAACTGCT GGGAACGGCC
CTCGCACTCG TTTTCATTGG CGGTGCGGCC GGCAAGTTCA TGTGCGGCTG GCTCGGCGCG
CGCCTGGGTA TGGTGAGGAC GGTGCTGCTC ACGGAGGGCG GGACAGCAGC GTGCATCATC
GCGGTGATGT ATCTCCCGTT GGCGCCGAGC ATGGTGCTGC TGCCGATTCT GGGTATGATG
CTCAACGGCA CTTCGTCGGT GCTGTACGGA ACCGTCCCCG AGCTGTCCGC ACCCGAGCGC
ACCGAGCGCG CATTCGCGAT TTTCTATACG GGGACGATCG CATCGGGCGC GCTATCGCCC
GTTCTCTACG GTTTCCTGGG CGACCGGATC GGTGTGCACG GCGCCACCTA TGCGACCGCG
TTGACCGCCC TCGCGATTTT TCCGCTCGCC CTCGCACTGC GCCCGCATCT GGCGGATGAC
CCGACAGGAG GAACACCATG A
 
Protein sequence
MRLPVFSPPV TRETAPPRRR ALWLSCVAHA MHDGYTDMIY ALLPVWQSEF GLDFAALAIL 
RGVYAGTMAT LQLSAGRLAQ RLGSRATLAL GTLLAALGYA LAGMSGGLLG LGVALAISGG
GSSTQHPIAS GAVSRFYGRD ARGPLSIYNF SGDLGKSALP AAISLLVTLM PWRHALWIVA
GLGCVVAAVI ALWFPAVPRG GANTTAKEHA SAQRGGTGKS GFSALFSIGV LDTAVRMGLL
TFLPFLLKAK GVSPQLLGTA LALVFIGGAA GKFMCGWLGA RLGMVRTVLL TEGGTAACII
AVMYLPLAPS MVLLPILGMM LNGTSSVLYG TVPELSAPER TERAFAIFYT GTIASGALSP
VLYGFLGDRI GVHGATYATA LTALAIFPLA LALRPHLADD PTGGTP