| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5466 |
|---|
| Symbol | |
|---|
| ID | 4094367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2770051 |
|---|
| End bp | 2770992 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638018746 |
|---|
| Product | SMP-30/gluconolaconase/LRE-like region |
|---|
| Protein accession | YP_625312 |
|---|
| Protein GI | 107027801 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.470278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTATC TGACGAGTCC CGACGTACGC GAAGCCGAAG TATTCACGCG CATGCCGGAG
AAGTTTCGCA AGCCGGACGT CCGCACGGAA TGGGCGCGCG CGAATCGCGG CGGCATGGTC
ACCGATTCCT TTCTCGAAGG GCCGGTCTGG GACCCGGACG GCTATCTGTT CGTCACCGAC
ATTCCGCACG GGCGCATCTT CCGCATTTCG CCGTCGGGCG ACTGGGATCT CGTCGTCGAA
TACGACGGCG AGCCCAACGG GATGAAGCGC TTCGACGCAT CGCACCTGAT CATCACCGAC
TACCGGAACG GCCTGATGCT GCTCGATATC GAGCGCGGTG AAATTCGCCC GCATCTCGAG
CGCCGCAACA CCGAGCGCTT CAAGGGCGTG AACGACCTGA CGTTCGACTC GGCCGGCAAC
CTCTATTTCA CCGACCAGGG GCAGACCGGG CTGCACGATC CGACGGGCCG CGTGTATCGG
CTGTCGCCCG ACGGCAAGCT CGACATGCTG CTCGGCACCT GCCCGAGCCC GAACGGGCTC
GTCCTGTCGC GCGACGAGAA GGTGCTGTTC GTCGCGATGA CGCGCGGCAA TGCCGTGTGG
CGCATGCCGT TGCAGGCCGA CGGGTCGGTC AGCAAGGTCA GCCAGTTCTT TACCTCCTAC
GGACCGAGCG GGCCCGACGG CCTCACCGTC GATCTCGAAG GCCGCCTGTT CGTCGCGAAT
CCGGGGCTCG GCCGCGTGTG GGTGCTCAAC CATTGCGCGG AGCCCGTCGA GATCCTGACC
GGACCGAAAG GGGCGTCGCT CACGAGCGTG TGCTTCGGCG GCCCGGACAT GAAGACGCTT
TTCATCACCG AATCGACGTC CGGTTCCGTC CTGAAAGCGG ACATGAGTAT TGCCGGCCCG
CTGCCGAAAC AGGCAGCGAA ACGGGCAGTG AAGCAGGACT GA
|
|---|
| Protein sequence | MFYLTSPDVR EAEVFTRMPE KFRKPDVRTE WARANRGGMV TDSFLEGPVW DPDGYLFVTD
IPHGRIFRIS PSGDWDLVVE YDGEPNGMKR FDASHLIITD YRNGLMLLDI ERGEIRPHLE
RRNTERFKGV NDLTFDSAGN LYFTDQGQTG LHDPTGRVYR LSPDGKLDML LGTCPSPNGL
VLSRDEKVLF VAMTRGNAVW RMPLQADGSV SKVSQFFTSY GPSGPDGLTV DLEGRLFVAN
PGLGRVWVLN HCAEPVEILT GPKGASLTSV CFGGPDMKTL FITESTSGSV LKADMSIAGP
LPKQAAKRAV KQD
|
|---|
| |