Gene Bcen_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5342 
Symbol 
ID4095290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp2642439 
End bp2643098 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID638018623 
Producthypothetical protein 
Protein accessionYP_625189 
Protein GI107027678 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.74312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGTTA GATACGATCG CGTCATGAGC AAAACGCAAC CTTCCGTCAC GATCGACTGC 
CTGATCCCGG CGCCGCCCGA GACCTTGAGC CTTGACTTCG CGAACACGCT GTACTGGCGC 
GGCAGCGATC CGCCGACGGA AACCTTCGGC CGGCTGGACG ACTTGCTGAC GTGGTGTCGC 
GAACAGGCGG GCGTGCCGGC CGGTCTGGTC GACGCATGTC GCGTGCCCGA CAAGGCGAAA 
GAGAAGGAGA CGGGCGACGA GCCGGCGATG CTTGCGCGGG CGCTCGCGTT GCGCGAGGCG 
CTATACCGGC TCTTTCACGC GCAGGCGGAG CAACGCGAGC CGCAGCCCGA CGATCTCGCG 
CTGCTCGGCG GCTTCCTCGC GGAGGCGTCG CCGCGCGTTG CGCTGGCGCG CGTGGACGGC 
CGCTATGCGT GGCGGATCGA TGCGTCGGGG GCGACGCTCG CGGGGCTGTT GAGCCCGGTG 
CTGTGGTCGG CGATCGATCT GCTCGGCGGC GCGCGGCTCG TGAAGGTCAA GCGCTGTGCG 
AACGATGCAT GCCAGTGGCT GTTCATCGAC GACAGCAAGA ACGGCAGCCG ACGCTGGTGC 
TCGATGTCGT CGTGCGGCAA TCGCGCGAAG GCGTATCGCC ACTATCACAA GGCCGAATGA
 
Protein sequence
MVVRYDRVMS KTQPSVTIDC LIPAPPETLS LDFANTLYWR GSDPPTETFG RLDDLLTWCR 
EQAGVPAGLV DACRVPDKAK EKETGDEPAM LARALALREA LYRLFHAQAE QREPQPDDLA 
LLGGFLAEAS PRVALARVDG RYAWRIDASG ATLAGLLSPV LWSAIDLLGG ARLVKVKRCA 
NDACQWLFID DSKNGSRRWC SMSSCGNRAK AYRHYHKAE