Gene Bcen_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5242 
Symbol 
ID4095191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2537494 
End bp2538342 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID638018523 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_625089 
Protein GI107027578 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.425206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGTA TCCAGGAGCG CGTCGCGCAA GCCGTGACGC CCGAACTGAT CGCCGCGTTC 
CGCGAGGAAG GCGCGGTCTG CATCAAGGGC ATTTTTTCGC CTGACGAAGT GGCCGCGCTG
CGGGCCGGCA TCGACGCGAA CCTCGCGCAA CCGAGCGAAC GCGCGAAAGT CGCGAGCCGG
CCCGACGATC CGGGCTGGTT CTTCGAGGAT TTCTGCAACT GGCAGCACAA CGACGCGTAT
CGCGATTTCA TCGTGCGCTC GCCGGCGCCG TCAGTCGCCG CCGCGCTGAT GGGCACCGAC
CACGTGCGGC TGCATCATGA TCACCTGCTC GTGAAGAAGC CCGGCACGCG GCAGCGCACG
CCGTGGCATC AGGACCAGCC GTACTACGAC ATCGAAGGCG ACGACAACGT CAGCATGTGG
ATTCCGGTCG ATCCGGTGCC GCTCGAATCG ACGCTGGAAT TCGTCGCGGG CTCGCATCGC
GGGCCGTGGC TGATGCCGCG CACGTTCATG GACAAGGAGG CGAAGTGGTT TCCGGAAGGC
AGCCTCGCCG ACCTGCCCGA CATCGAAGCC GACCGCGCGG CCTTCCCGAT TCGCCGCTGG
GCGCTCGAAC CCGGCGACAT GGTGTGCTTC CGGATGCTCA CGCTGCATGC GTCGGGCGGC
ACGCAGAACC GCCGCCGTGC GTTCTCGATC CGCTTCGTCG GCGATGATAT CCGTCACGCG
CCGCGCCGCT GGAAAACGTC GCCCGATTTC CCCGGGCTCG CGGCGCAACT GGCCGACGGC
GCACCGCTCG ATCATCCACT GTTTCCGGTG GTGTGGTCGC GCGACGCGGG GCAGGTCGGC
GCGATCTGA
 
Protein sequence
MTSIQERVAQ AVTPELIAAF REEGAVCIKG IFSPDEVAAL RAGIDANLAQ PSERAKVASR 
PDDPGWFFED FCNWQHNDAY RDFIVRSPAP SVAAALMGTD HVRLHHDHLL VKKPGTRQRT
PWHQDQPYYD IEGDDNVSMW IPVDPVPLES TLEFVAGSHR GPWLMPRTFM DKEAKWFPEG
SLADLPDIEA DRAAFPIRRW ALEPGDMVCF RMLTLHASGG TQNRRRAFSI RFVGDDIRHA
PRRWKTSPDF PGLAAQLADG APLDHPLFPV VWSRDAGQVG AI