Gene Bcen_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5203 
Symbol 
ID4095034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2493181 
End bp2494338 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID638018484 
ProductABC transporter related 
Protein accessionYP_625050 
Protein GI107027539 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.300266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCA TCTCGATGCG ACGCGTGCAG AAAGCCTATG GCGAGCACGC GCCGGTCATT 
CGCGACGTCG ATCTGGAGAT CGGCGCGCAC GAGTTCTGCG TGTTTCTCGG GCCGTCCGGC 
TGTGGGAAAT CAACGCTGCT GCGCATGATC GCCGGGCTCG AGGATCTGAG CGCGGGCGAG 
CTGTCGATCG ACGGCCGCCG CGTCGACGAC GTGCCGGCCG CCGAGCGCGG CGTCGCGATG 
GTGTTCCAGA GCTACGCGCT GTTTCCGCAC ATGACGGTGT ACGAGAACAT GGCGTTCGGG 
CTGAAGCTCG CGCGCGTGCC GAAGGCCGAG ATCGACCGCA AGGTACGCGA CGCCGCGCGC 
ATCCTGCAGC TCGACACGCT GCTCGAGCGC AAGCCGAAGG CGCTGTCCGG CGGCCAGCGG 
CAGCGCGTCG CGATCGGCCG CGCGATCGTG CGCGAGCCCG GCGTATTCCT GTTCGACGAA 
CCGCTGTCGA ATCTCGATGC GGCGCTGCGC GGCCAGACCC GCGTCGAAAT CGCGAAGCTG 
CATCGGCAGT TCGAACGTGC GAGCGTCGTC TACGTGACGC ACGACCAGAC CGAGGCGATG 
ACGCTCGCCG ACAAGATCGT GCTGCTGCAC GCCGGCGCGG ATACCGCGCG GCACGGCAGC 
ATCGCTCAGG TCGGCGCGCC GCTCGACCTC TATCACCATC CGGCCAGCCG CTTCGTCGCG 
GGCTTCATCG GCTCGCCGCG CATGAACTTC CTGCCGGCCG TCGTGACCGC GTGCGACGCG 
CGTCGCACGA CCGTCACGCT CGTGCCGTCC GGCGAAACCT TCACGCTGCC GCGCGACGGC 
TCGGCGCTCT CCGCCGGCGC CGCCGTGACG CTCGGCATCC GTCCCGAACA CCTGACGCTC 
GGCGCCGCCC CCGATGCGAC GACGCTCGCG CGCGACGTCG CGCTCGTCGA ACGCCTCGGC 
GAGCAGACCT ACGTGCACCT CGACTCGCCC GGCCTACCCG ACGCGACGCC GCTGATCGCG 
AAAGTACCCG GCGACGCGCC GGTGCGCACC GGCGAACGCG TGCACGTGCA CGCGCCGGCC 
GCGGCCTGCC ACCTGTTCAC CGAAGACGGC CGCGCGGTGC CCGCGTGCGC CGACCTTCCC 
GTCCACCACT ACGCATAA
 
Protein sequence
MASISMRRVQ KAYGEHAPVI RDVDLEIGAH EFCVFLGPSG CGKSTLLRMI AGLEDLSAGE 
LSIDGRRVDD VPAAERGVAM VFQSYALFPH MTVYENMAFG LKLARVPKAE IDRKVRDAAR 
ILQLDTLLER KPKALSGGQR QRVAIGRAIV REPGVFLFDE PLSNLDAALR GQTRVEIAKL 
HRQFERASVV YVTHDQTEAM TLADKIVLLH AGADTARHGS IAQVGAPLDL YHHPASRFVA 
GFIGSPRMNF LPAVVTACDA RRTTVTLVPS GETFTLPRDG SALSAGAAVT LGIRPEHLTL 
GAAPDATTLA RDVALVERLG EQTYVHLDSP GLPDATPLIA KVPGDAPVRT GERVHVHAPA 
AACHLFTEDG RAVPACADLP VHHYA