Gene Bcen_5054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5054 
SymbolpdxA 
ID4094015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2334885 
End bp2335940 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content72% 
IMG OID638018336 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_624902 
Protein GI107027391 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.691644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCC CCTCGACCGC CGCCGCCCTG CCCGTCGTCG CGCTGACGCT CGGCGACCCC 
GCCGGTATCG GCGCCGAACT GATCGCGAAA CTGCTCGCCC GCCCCGACGC GACCGCCCGC
GCGAACCTCG TGCTGATCGG CGATCGCTGG CTGTGGGAAG CCGGCCAGCG TGTCGCCGGC
GTCAAGGTCG ACGTCGAACC CGTCGCGTCG CTGGCCGCCG CGCGCGACCG GCCGTCGGCC
GCGCGCGCCG CGTTCGTCGC CGTCGACACG GTCGATCCCG CGCAGGTCAC GGTCGGCCAG
GCGAGTGCCG CCGGCGGCCG CTCGACGCTC GCCGTGCTCG ACCGCTGCCT CGACGCCGCA
CTGGCCGGCG ACATCGACGC GATCTGCTTC GCGCCGCTGA ACAAGTACGC GATGAAGCTC
GGCGGGCTGC GCCACGACGA CGAGCTGCAC CACTTCGCCG AGGCGCTCGG CGTGACCGGC
TACTTCTGCG AATTCAACAC GCTCGGCGAG CTGTGGACCG CGCGGATCTC GTCGCATATT
CCGTTGAAGG ACGCGGCGGC CCAGTTGAGC ATCGAGCGGA TCGAGCAGGC GTCCGAGCTG
ATCTACCGGT CGCTGCTCGC GAACGGCGTC GCCGCGCCGA AGGTGGCGAT CGCCGCGTTC
AACCCGCACG GCGGCGACGG CGGCAGTTGC GGCCGCGAGG AAGTCGACAT CATCGAGCCG
GCCGTGCGCC GCTTGCAGGC GCGCGACTGG CCGACCGACG CGCCGTTCCA CGGCCCGTTC
CCGGCCGACA CGATCTTCCT GAAGGCGCAG GCCGGCGACT ACCAGGCGAT CGTCACGATG
TATCACGACC AGGGGCAGAT CGCGATCAAG CTGCTCGGCT TCTCGCGCGG CGTGACCGTG
CAGGGCGGGC TGCCCGTACC GATCACGACG CCCGCGCACG GCACCGCATA CGACATCGCG
GGCCGCGGCA CGGCCGACGT CGGCGCGACC TGGCAGGCGC TGCAGATTGC GTGCCGAATG
GGCGCCGCGC GGCGTTCGCA GATCGTTTCG GCGTGA
 
Protein sequence
MPTPSTAAAL PVVALTLGDP AGIGAELIAK LLARPDATAR ANLVLIGDRW LWEAGQRVAG 
VKVDVEPVAS LAAARDRPSA ARAAFVAVDT VDPAQVTVGQ ASAAGGRSTL AVLDRCLDAA
LAGDIDAICF APLNKYAMKL GGLRHDDELH HFAEALGVTG YFCEFNTLGE LWTARISSHI
PLKDAAAQLS IERIEQASEL IYRSLLANGV AAPKVAIAAF NPHGGDGGSC GREEVDIIEP
AVRRLQARDW PTDAPFHGPF PADTIFLKAQ AGDYQAIVTM YHDQGQIAIK LLGFSRGVTV
QGGLPVPITT PAHGTAYDIA GRGTADVGAT WQALQIACRM GAARRSQIVS A