| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5052 |
|---|
| Symbol | |
|---|
| ID | 4094013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2332340 |
|---|
| End bp | 2333611 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638018334 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_624900 |
|---|
| Protein GI | 107027389 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.344485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACG ACCATCGTCA ACGGCGCCAC ACATTGTGGC TGCTGTGCGC GCTTTCGTTC
ATCCTCTACG TCGATCGCGT CAATCTCGCG ACCGCCGCCG GCGCGATCAA GGCCGAACTC
GGGCTATCGA ATACCGAGCT CGGCGTCGCA TTCTCCGCGT TCGCGTATTC GTATGCAATC
TGCCAGATCG GCGGCGGCTG GATCGCCGAC CGGTTCGGCG CGCGCATCAC GTTGATCGGC
TGCGGGCTGA TCTGGGTCGT CGCCACGTTC ACGACCGGGC TCGTGCACAG TCTCGGGCTG
CTGTTCGCCG CGCGGCTGCT GCTCGGCATC GGCGAAGGCG CGACGCTGCC GGCCCAGGCC
CGAGCGGTCA CGCACTGGTT CCCGCGCGAG CGGCGCGGCG TCGTGCAGGG CTTCACCCAT
TCGTTCTCCC GGCTCGGCAA CGCGGTCACG CCGCCGATCG TCGCCGCGCT GATGACGTGG
CTGTCGTGGC GCGCGGCGTT CTTCGTGATC GGCGCGGTCA CGCTGGTGTG GCTCGCGTGG
TGGATCGTCG GCTTCCGCGA GCATCCGGCG GGCGACGACG ACGGCCGCAC GCGCACCGCG
CGCCCTGCCG CACCGTCCGG CCCGACGCCG TGGGGGCCGC TGTTCCGACG CATGGCGCCG
ACCATCTTCG TCTACTTCTG CTACGGCTGG ACCGCGTGGC TGTTCTTCAC GTGGTTGCCG
ACCTTCTTCC TGAACGGCCA GGGCCTGAAC GTGAAATCGA CCGCGTTGTT CGCGTCCGGT
GTGTTCTTCG CGGGCGTGGT CGGCGATACG CTCGGCGGCT GGCTCTGCGA CCGGATCTAC
CGAAAGACCG GCAACCTCGC GCTGTCGCGC CAGAGCGTGA TCGTCACGAG CTTCGTCGGC
GCGCTCGTCT GCTTGCTGCC GCTCGCGTTC GTGCACTCGA CGGCCGGCGT CGCGCTGTGC
CTGTCGGGAT CGTTCCTGTC CCTCGAACTG ACGATCGGGC CGATCTGGGC CGTGCCGAGC
GACATCGCGC CGACCCATGC CGGCATCGCG AGTGGGATGA TGAACGCCGG TTCCGCGATC
TCGGGAATCC TGTCGCCGAT CCTGTTCGGC TATCTCGTCG ATCGCACCGG CAGCTGGACG
GTGCCGTTCG TCGGCTCGGT CGCGATGCTG CTGATCGGCA TCGTCGCCGC GCTGCGGATT
CGCCCGGACC GCGCGCTGTC CGAATCGATG CCGGCGCTCG TCGACGCGCC TGCTGCGCCG
TCGGTGCGCT GA
|
|---|
| Protein sequence | MPNDHRQRRH TLWLLCALSF ILYVDRVNLA TAAGAIKAEL GLSNTELGVA FSAFAYSYAI
CQIGGGWIAD RFGARITLIG CGLIWVVATF TTGLVHSLGL LFAARLLLGI GEGATLPAQA
RAVTHWFPRE RRGVVQGFTH SFSRLGNAVT PPIVAALMTW LSWRAAFFVI GAVTLVWLAW
WIVGFREHPA GDDDGRTRTA RPAAPSGPTP WGPLFRRMAP TIFVYFCYGW TAWLFFTWLP
TFFLNGQGLN VKSTALFASG VFFAGVVGDT LGGWLCDRIY RKTGNLALSR QSVIVTSFVG
ALVCLLPLAF VHSTAGVALC LSGSFLSLEL TIGPIWAVPS DIAPTHAGIA SGMMNAGSAI
SGILSPILFG YLVDRTGSWT VPFVGSVAML LIGIVAALRI RPDRALSESM PALVDAPAAP
SVR
|
|---|
| |