| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4952 |
|---|
| Symbol | |
|---|
| ID | 4093915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 2219566 |
|---|
| End bp | 2220477 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638018234 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_624800 |
|---|
| Protein GI | 107027289 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCGA TTCCTCCGCT GAAAGCCCTG CCTGCCTTCG AAGCTGCCAT GCGGCACGGC
AGTTTTACTC TTGCATCCCG GGAACTGAAC GTGACGCCTG GTGCGATAGG GCAGCAGATT
CAGAAGCTTG AGGAATGGCT CGGCGTTGCC CTGTTCGTGC GCCAGATACG GCAGGTAACG
CCGACAGAGG ATGGTCGCGC CTACTTCGCG CAGATTCAAC CCGCCCTGGC AGAGCTTATT
CATGCGAGCC ATCGCATTCG TGAGCGTCGC GGTAGCGGCG TGCGGTTGTC GATGCCGCCG
AGCTTCGCTG CCAAGTGGTT CGCCCCACGC ATGGCCGACT TCCTGCAGGC AAACCCCGGG
ATTGCGCTGA GCCTGAGCAC ATCGACAACG ATGGTCGACT TCGAACTGGA TGACGTCGAT
CTCGCGGTTA GGCATTTCGA CGGGATGGAT GCACGACTAT CCGTTCAACT GCTGTGCCAT
GACGAGGCAC GCGCGTATTG CCATCCGGTA TACGCGAAGC AGCGCCGATT GAAGCGCCCC
GACGATTTGC GCACGGCGAC ACTGCTCCAT AACACGCTAC ACCCGCACTG GGCCACGTGG
CTTGCTCGAT TCAGCGGTCT CGACGGTTCG CAGATCGAAA CCATTACCGG TATCCGGTTC
GACCAGTCGT TGATAGCGAT CGACGCCGCA GTGCGCGCGC AAGGCGTTGT GCTTACCAGC
CCCCTGCTGG TAGAAGCGGA ACTGGCTCGT GGAGAACTGA TTGAGCCATT CGATAATGCG
CTTGCGTTGG ACGCCGGATA TTACCTCGTC CATCCCGCCA GTGCCGGAAC CAAACAGGCG
GTTCAATTGC TCAAGGCGTG GTTTACCGAC AGCATCGCCA GGGGATGTGC GCAGCGTGGA
GGCTACTTCT AG
|
|---|
| Protein sequence | MRSIPPLKAL PAFEAAMRHG SFTLASRELN VTPGAIGQQI QKLEEWLGVA LFVRQIRQVT
PTEDGRAYFA QIQPALAELI HASHRIRERR GSGVRLSMPP SFAAKWFAPR MADFLQANPG
IALSLSTSTT MVDFELDDVD LAVRHFDGMD ARLSVQLLCH DEARAYCHPV YAKQRRLKRP
DDLRTATLLH NTLHPHWATW LARFSGLDGS QIETITGIRF DQSLIAIDAA VRAQGVVLTS
PLLVEAELAR GELIEPFDNA LALDAGYYLV HPASAGTKQA VQLLKAWFTD SIARGCAQRG
GYF
|
|---|
| |