Gene Bcen_4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4878 
Symbol 
ID4095158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2141245 
End bp2142096 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID638018162 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_624728 
Protein GI107027217 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCGA TGCCCGTGTC CCGCTGGGGA CGTCCCGCCC GTTGGTTGTA CCGGCTGTCG 
CTGCCGTGCG CGCTCGCGCT GTGGCTCGTG CCGCTGCTCG CGGTGCTCGT CACGTCGATC
CGCTCGACCG ACGAGATCAT CGCCGGTCAT TACTGGGACT GGCCGAAACA GTTTGCGCTG
CTGGACAACT ACGGCGCCGC GCTCGCGCAG ACGCCGATGC TGCATTACTT CGCGAACAGC
GTTCTGATCA CGGTGCCGTC CGTCGCCGCA TCGATCCTGC TCGCGTCGCT CGCCGGGCAC
GCGCTCGCGA ACTTCCGGTT CCGCGGCAAC CTCGTGCTGC TCGGGCTGTT CGTCGCCGGC
AACTTCGTGC CGATCCAGAT TCTGATGATC CCGGTGCGGC AGATCATGCT CGGCGTCGGT
CTCTACAACA CCGTGTGGGC GCTCGTGCTG TTCCATACCG CGTTCCAGAC CGGCTTCTGC
ACGCTGTTCC TGCGCAACTT CATCCGCGAG CTGCCGTTCG AGCTGATCGA GGCCGCGCGC
GTCGAAGGCG CGTCCGAGTG GGCGATCTAC TGGCGCGTCG TGCTGCCGCT CGTGCGGCCG
GCGCTCGCCG CGCTCGCGAT CCTCGTGTTC ACGTTCGTGT GGAACGACTA CTTCTGGGCA
CTGTGCCTCA CGCAAGGCGA CGACGCGGCG CCGATCACCG TCGGCGTCGC CGCGCTCAAG
GGGCAGTGGA CGACCGCCTG GAACATCGTG TCGGCCGGCT CGGTACTCGC CGCGCTGCCG
TCGGTCGCGA TGTTCTTCGC GATGCAGAAG CATTTCGTCG CGGGGCTCAC TTTCGGCGCG
ACGAAGGGCT GA
 
Protein sequence
MYPMPVSRWG RPARWLYRLS LPCALALWLV PLLAVLVTSI RSTDEIIAGH YWDWPKQFAL 
LDNYGAALAQ TPMLHYFANS VLITVPSVAA SILLASLAGH ALANFRFRGN LVLLGLFVAG
NFVPIQILMI PVRQIMLGVG LYNTVWALVL FHTAFQTGFC TLFLRNFIRE LPFELIEAAR
VEGASEWAIY WRVVLPLVRP ALAALAILVF TFVWNDYFWA LCLTQGDDAA PITVGVAALK
GQWTTAWNIV SAGSVLAALP SVAMFFAMQK HFVAGLTFGA TKG