| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4638 |
|---|
| Symbol | |
|---|
| ID | 4093871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1901510 |
|---|
| End bp | 1902199 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638017924 |
|---|
| Product | amino acid ABC transporter permease |
|---|
| Protein accession | YP_624491 |
|---|
| Protein GI | 107026980 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTCC AAGGATTTGG CCCGCTGCTG TGGGCCGGCA CGGTCGAGAC CGTGAAGCTC
GCGGTGCTGT CGCTCGCCGC GTCGCTGATA CTGGGCCTTG CAGGCGCGGC CGCGAAACTG
TCGGCCAACC GCGTGCTCAA GTCGGTCGGC ACGTTCTACA CGACGCTGAT CCGCGCGGTG
CCAGACCTCG TGCTGATGCT GCTGCTGTTC TACGGGATCC AGATCCTGCT GAATAACGTG
ACGGACCTGC TCGGCTGGGA CCAGATCGAC ATCGACCCCT TCGCGGCCGG CGTCGTCACA
CTGGGCTTCA TCTACGGCGC GTACTTCACC GAGACGTTCC GCGGCGCGTT CCTCGCGGTG
CCGCGCGGCC AGCTCGAAGC CGGCTTCGCG TACGGGATGA GCGGCTGGCG CGTATTTCAC
CGCATCCTGT TCCCGCAGAT GATGCGCTTC GCGCTGCCAG GCATCGGCAA CAACTGGCAG
GTGCTCGTGA AAGCCACCGC GCTCGTGTCG ATCATCGGCC TCGCCGACGT CGTGAAGGCG
TCGCAGGACG CGGGCAAGAG CACGCTCGAT TTCTTCTTCT TCACGCTGGC GGCAGGCGCG
ATCTACCTCG CGATCACGAC GGTGTCCAAC GTCGTGCTGC ATCACCTCGA GAAGCGTTAT
TCCGTCGGCG TCCGGAGGCT CGCACTGTGA
|
|---|
| Protein sequence | MIFQGFGPLL WAGTVETVKL AVLSLAASLI LGLAGAAAKL SANRVLKSVG TFYTTLIRAV
PDLVLMLLLF YGIQILLNNV TDLLGWDQID IDPFAAGVVT LGFIYGAYFT ETFRGAFLAV
PRGQLEAGFA YGMSGWRVFH RILFPQMMRF ALPGIGNNWQ VLVKATALVS IIGLADVVKA
SQDAGKSTLD FFFFTLAAGA IYLAITTVSN VVLHHLEKRY SVGVRRLAL
|
|---|
| |