Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4318 |
Symbol | |
ID | 4094905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1538901 |
End bp | 1540220 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638017609 |
Product | major facilitator transporter |
Protein accession | YP_624177 |
Protein GI | 107026666 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCC GATCCACCCT CGATGAGCAT GCGACCATCG CGACGCCGGC GCCCGAGCGC ACCGCGAAGC ACTACCTGCT GGCCGGCTGG GCCAGCATGG CCGGCACCAC GATCGAGTGG TACGACTTCT TCCTGTACGG CACGGCCGCC GCGCTCGTGT TCAACCGCAT CTTCTTCCCG TCGCTGGACC CGGTCGTCGG CACGCTCGCC GCGTTCGGCA CGTTCGCGGT CGGCTTCATC GGGCGGCCGA TGGGCGGCAT CGTGTTCGGC CACTTCGGCG ACCGCATCGG CCGCAAGTCG ATGCTGATGA TCACGCTGCT GCTGATGGGC GTGCCGAGCA TGATCATCGG GCTGATCCCG TCGTACGACA GCATCGGCTA CTGGGCCGCC GCGCTCCTGA TCGCGATGCG CTTCCTGCAG GGCATGGCGG TGGGCGGCGA ATGGGGCGGC GCGGTGCTGA TGGCCGTCGA GCACGCGCCG AAGGGCCGCA AGGGGCTGTT CGGCAGCCTG CCGCAGACGG GCGTCGGGCT CGGCCTGATC CTGTCGTCGG TGGCGATGGC CGCGGTGGCC GCGCTGCCGG AAGCCGACAT GCTGTCGTGG GGCTGGCGCG TGCCGTTCCT CGCGAGCATC GCGCTCGTCG GCCTCGGCTG GTTCATCCGC GCGAAGGTGC CGGAATCGCC CGACTTCGAG AAGATACAGC GCCAGGGCAA GGCCGAGAAA TCGCCGGTGA CGGCCGCGCT GCGCCGCCAT CCGCGCGAGG TGCTGACGAT CGTCGGCGCA CGCGCCGCCG AGAACACCTG GTTCTACATG GTCGTCACGT TCGCGCTCGC TTACGCGACG CAGCAGCTGC ACCTGCCGAA GGCCGAGATG CTGCACGCGA TCACGGCCGG CGCGGCGCTG TCGCTCGTCA CGATGCCGCT GTGCGGGCAT CTGAGCGACC GCATCGGGCA GCGCCGGATG TTCGCGATCG GCCTCGTGCT GATGTGCGCG TTCGCCGCAC CGTTCTTCAT GATGCTCGGC ACGCAGCAGA CTTCGACCGC ATGGTGGGCG ATCGTGCTCG GCCTCGGCGT CGTGTTCCCG ATCCTCTATG CGCCGGAATC GCTGCTGTTC GCGCAGCAGT TCCCGGCGGA AATCCGCTAC AGCGGCATCT CGCTGTCGGT GCAGCTGGCC GGCGTGATCG GCGGCGGTTT CGCGCCGATG ATCGCGACGT CGCTGCTCAA GGCCGGCGGC GGCCAGCCGC ACTACGTGAT CGCGTACCTC GTCGGCTTCG GCGTGTTCGC CCTCGTGTGT ACCGCATTGA TGCGCCCGGC GCGCGCCTGA
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Protein sequence | MQTRSTLDEH ATIATPAPER TAKHYLLAGW ASMAGTTIEW YDFFLYGTAA ALVFNRIFFP SLDPVVGTLA AFGTFAVGFI GRPMGGIVFG HFGDRIGRKS MLMITLLLMG VPSMIIGLIP SYDSIGYWAA ALLIAMRFLQ GMAVGGEWGG AVLMAVEHAP KGRKGLFGSL PQTGVGLGLI LSSVAMAAVA ALPEADMLSW GWRVPFLASI ALVGLGWFIR AKVPESPDFE KIQRQGKAEK SPVTAALRRH PREVLTIVGA RAAENTWFYM VVTFALAYAT QQLHLPKAEM LHAITAGAAL SLVTMPLCGH LSDRIGQRRM FAIGLVLMCA FAAPFFMMLG TQQTSTAWWA IVLGLGVVFP ILYAPESLLF AQQFPAEIRY SGISLSVQLA GVIGGGFAPM IATSLLKAGG GQPHYVIAYL VGFGVFALVC TALMRPARA
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