Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4234 |
Symbol | |
ID | 4095582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1439913 |
End bp | 1441457 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638017525 |
Product | RNA polymerase, sigma 38 subunit, RpoS |
Protein accession | YP_624093 |
Protein GI | 107026582 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACGC CACGCCCCAC TCCCCGGGCG GACACACCGC TCGATCCGAT CATCCAGCTG CTGGCGCTCG CCGGCGAGCA GGGTTATCTG ACGCACGCCG ACCTCGTCGA CGCGCTGCCG CCCGAAAGCG ACAGCTCCGA CGCGCTCGAC GTCGTGCGCG CCGCGCTGGC CGACATCGGC ATCGCGGTAC TCGACGAGCC GGCCGTGCCC GCACCGTTTG CCGGCGCGGC GCCGGTCGAG GTCGATCGCG ACGCGCTCGA CGAAGGCCGG GCCATGCTCG GCGACCTCGC GCGCGGTACG AGCGCGTCGA CCGATCCGCT CGCGCTCTAC ATGCGGCGCA TGCATGCGGT GCCGCTGCTC ACGCGCGAAG GTGAAATCGT GCTCGCCCGC GAGATCGAGA CGGGCCGTCA TCAGGTGCTG CATGCGATCG CCGGCTATCC GCCCGCGGTC GACGCACTGC TCGAGCGTCA TCGCGCGACG GGCGCAACCG GCGCAATAGG CACAACCGGA TCGCCCGATG AAGAGGATGG CGAAACGCCC GCGCCCGCCC GCTACGACGC GCTGCAGGCA GCGGTGTCGG CGCTGCGCGA TGCATTGCAT GCGCATGGCA GCCGTTCGGC CGACTACCGC GACGCGCGCA ACCACGTGGC CGCCCTGCTC GGTTCGCTCG CCTGGGTCGC ACCGGCCGTC GACGACGCAA GCCGTACCGT GCGCGCGCTC GCGGCCGCCT CCGATGATCC GTCGGCGGTC GACGCCGCGT ACTTCGACGC GGTCGCACGG CGCGCACTTG CAGCCGCGTT GAGCGACGGC CAGCAAAAAG TGCGCGACGC GACGCGGGCG ATGCTCGAGG CGAACCTGCG GCTCGTGCTG TCGATCGCGC GCAAGTACCT GAACCGCGGC GTCGATCTGT CCGACCTCGT GCAGGACGGC TGTCTCGGCC TGATGCGCGC GATCGAGAAA TTCGAATACC GGCGTGGGTT CAAGTTCTCG ACCTATGCGA CCTGGTGGAT TCGCCAGGCG ATCGCACGCG CGGTCGCGGA TCGCTCGCGT ACGATCCGCG TGCCGGTGCA CGTCGGCGAT CAGTACCAGC GCGTGCAGCG GCATGCACTG CGCTTTCGCC AGCGCACGGG CCGCCGCGCC ACGCCGGCCG AGCTCGCGGC TGAAACCGGC CTCGCCGAAG ACAAGCTGCG TGCGGTGCTC GCGCTGCCCG CCGAGCCGGT CTCGCTCGAT ACGCCGCTGC CGGACGCAGA CACCGGCCTC GTGGAACTGA TCGAGGACCA GGCATCGGCC AGCCCGTTCG AGCAACTGGC CGACACGCGC ATGCGCGACT GCGTGCGATC GCTGCTGCGC TCGGTCACGC CGACCGAGGC CGACGTGCTG CGCCGGCGGT TCGGCCTCGG CGGCGCCGAG CCCGACACCT ACGACGCGAT CGCGCAGGAT GCGGGGATGT CGCGCGAGCG TGTCCGGCAG ATCGAGAAAC GGGCGCTCGC CGCGCTGCGT ACGGCCGCCG AAGCCGAGAA CGCACAGTCG TTTCTCGACG CGTAA
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Protein sequence | MTTPRPTPRA DTPLDPIIQL LALAGEQGYL THADLVDALP PESDSSDALD VVRAALADIG IAVLDEPAVP APFAGAAPVE VDRDALDEGR AMLGDLARGT SASTDPLALY MRRMHAVPLL TREGEIVLAR EIETGRHQVL HAIAGYPPAV DALLERHRAT GATGAIGTTG SPDEEDGETP APARYDALQA AVSALRDALH AHGSRSADYR DARNHVAALL GSLAWVAPAV DDASRTVRAL AAASDDPSAV DAAYFDAVAR RALAAALSDG QQKVRDATRA MLEANLRLVL SIARKYLNRG VDLSDLVQDG CLGLMRAIEK FEYRRGFKFS TYATWWIRQA IARAVADRSR TIRVPVHVGD QYQRVQRHAL RFRQRTGRRA TPAELAAETG LAEDKLRAVL ALPAEPVSLD TPLPDADTGL VELIEDQASA SPFEQLADTR MRDCVRSLLR SVTPTEADVL RRRFGLGGAE PDTYDAIAQD AGMSRERVRQ IEKRALAALR TAAEAENAQS FLDA
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