| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4134 |
|---|
| Symbol | |
|---|
| ID | 4094085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1315162 |
|---|
| End bp | 1315926 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638017428 |
|---|
| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase |
|---|
| Protein accession | YP_623996 |
|---|
| Protein GI | 107026485 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | [TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00258358 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGG CGCGCGTGAT CTACAACGGC GCACTGCATG CGGCCGAACC GGCCGGCGAC
GGCGCGATCC GCCTCGATAC GGGCCGCGTG GTGGCCGAGG ACGCGGTGGC GTGGCTGCCG
CCCGTCGCGC CGCGCACGAC GTTCGCGCTC GGCCTGAACT ACGCCGACCA TGCGAAGGAG
CTCGCGTTCA ACGCGCCGAG CGAGCCGCTG ATTTTCCTGA AGGGGCCGAA TACGTTCGTC
GGTCACCGGT CGCTGACCGT GCGCCCCGCG GACGCCACGC ACATGCACTA CGAGTGCGAA
CTGGCCGTCG TGATCGGCCG GCCCGCGCGC CACGTGAGCC GCGCGCAGGC CATCGACTAC
GTGGCCGGCT ATACGGTCGC GAACGACTAC GCGATCCGCG ACTATCTCGA GAACTACTAC
CGCCCGAACC TGCGCGTGAA GAACCGCGAC ACCTGCACGC CGCTCGGGCC GTGGTTCGTC
AGCCGCGACG AGATCGGCGA CGCGGGCGAC CTGACGCTGC GCACGACGGT GAACGGCCGG
GAGACGCAGC GCGGCAGCAC GCGCGACATG GTGTTCGACG TGCCGGCGCT GATCGAGCAC
ATCAGCAGCT TCATGACGCT CTCGCCGGGC GACCTGATCC TGACCGGCAC GCCCGAGGGG
CTGGCGGACA CGCAGCCGGG CGACGAGGTC GTGACCGAAA TCGAAGGAAT CGGCCGGCTC
GTGAACACGA TCGTCGGCGA GGCAGACTAC TATCGCGCCG GCTGA
|
|---|
| Protein sequence | MKTARVIYNG ALHAAEPAGD GAIRLDTGRV VAEDAVAWLP PVAPRTTFAL GLNYADHAKE
LAFNAPSEPL IFLKGPNTFV GHRSLTVRPA DATHMHYECE LAVVIGRPAR HVSRAQAIDY
VAGYTVANDY AIRDYLENYY RPNLRVKNRD TCTPLGPWFV SRDEIGDAGD LTLRTTVNGR
ETQRGSTRDM VFDVPALIEH ISSFMTLSPG DLILTGTPEG LADTQPGDEV VTEIEGIGRL
VNTIVGEADY YRAG
|
|---|
| |