| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4132 |
|---|
| Symbol | |
|---|
| ID | 4094083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1312777 |
|---|
| End bp | 1313625 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638017426 |
|---|
| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe |
|---|
| Protein accession | YP_623994 |
|---|
| Protein GI | 107026483 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0541165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAC TGTCCCTCGC CGCGAAGATC ACGCACGTGC CGTCGATGTA CCTGTCGGAA
CTGCCCGGCA AGCATCACGG CTGCCGTGAA GCGGCGATCC GCGGCCACCA GCTGATCGGC
GAGCGCTGCC GCGCGCTCGG CGTCGACACG ATCGTCGTGT CGGACGTGCA CTGGCTCGTC
AACGCCGGCT ATCACGTGAA CTGCAATGCG CGGTTCGCGG GCACCTATAC GAGCAACGAG
CTGCCGCATT TCATCCGCGA CATGCAGTAC GCGTATCCGG GCAACCCGGC GCTCGGCCGG
CTGATCGCGG AAACGGCCAC CGAGCGCGGC GTCGCGACGC GTGCGCACGA AATCGACAGC
CTCGAGCTCG AATACGGCAC GCTCGTGCCG ATGCGCTACA TGAACGGCGA CCAGCACTTC
AAGGTCGTGT CGATTGCCGG CTGGTGCATG TGGCATCAGC TCGACGAAAG CCGGCGCTTC
GGCGAGGCGC TGCTCGAGGC GATCGAGAAG AGCGATTCGA ACGTCGCGTT CCTCGCGAGT
GGCTCGCTGT CGCACCGCTT CAACGACAAC GGCAGCCCCG AGGAATCGAT TCACCAGATC
AGCCGCGAAT TCTTCCGGCA GGTCGACCTG CGCGTGGTCG AGCTGTGGAA GCAGGGCGAT
TTCAAGACCT TCTGCGCGAT GCTGCCCGAA TACAACGTGC ATTGCCACGG CGAAGGCGGC
ATGCACGACA CGGCGATGCT GCTCGGGCTG CTCGGCTGGG ATCGCTACGA CAAGCCGGTC
GAGATCGTCA CCGACTATTT CGCGAGTTCC GGCACCGGGC AGATCAACGC GATCTTCCCG
CTGCCCTGA
|
|---|
| Protein sequence | MGKLSLAAKI THVPSMYLSE LPGKHHGCRE AAIRGHQLIG ERCRALGVDT IVVSDVHWLV
NAGYHVNCNA RFAGTYTSNE LPHFIRDMQY AYPGNPALGR LIAETATERG VATRAHEIDS
LELEYGTLVP MRYMNGDQHF KVVSIAGWCM WHQLDESRRF GEALLEAIEK SDSNVAFLAS
GSLSHRFNDN GSPEESIHQI SREFFRQVDL RVVELWKQGD FKTFCAMLPE YNVHCHGEGG
MHDTAMLLGL LGWDRYDKPV EIVTDYFASS GTGQINAIFP LP
|
|---|
| |