Gene Bcen_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3875 
Symbol 
ID4095732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1035253 
End bp1036563 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content69% 
IMG OID638017170 
Productmajor facilitator transporter 
Protein accessionYP_623738 
Protein GI107026227 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCA TTCGATGGGC CATGATCCTG ATGTGCTTCC TGGCCAACGT CATCAACTTC 
ATCGATCGCG CGAACCTCGC GATCGCGGCG CCCAGCATCC GTGCCGACCT CGGGCTCGAC
GCGGTCGGCA TGGGGCTCGT GCTGAGCGCG TTCTTCTGGA CCTATGCGTT CCTGCAATTA
CCGGCCGGCT GGTTCATCGA CAAGGTCGGC GTACGCGTGA GCCTCGCGCT GGCCGTCGGC
TGGTGGTCGG TGTTCACCGT CGCGACGGGC GCCGCGCGCG GCCTCGCGCA ACTCGTCGGC
GTGCGGCTGA TGCTCGGCGT CGGCGAAGCG GCCGCGATCC CGTCGTTCGC GAAGGTCGCG
TTCAACTGGT TCCCGCGCAG CGAGCGCGGC CTGGCCAGCA GCATCTTCGA CAGCGGCTCG
CGCGTCGGCT CCGCGCTGTC GCTGCCGCTC GTCGCGTGGC TGATCTCGCT CGTCGGCTGG
CGCGGGTCGT TCGTGATCAC GGGCGGCATC GGCATCGTCT GGGCGCTCGC GTGGTGGTTC
GTCTATCGCG ACCCGGAACG CTATCGCGCG ATCGCGCCGG ACGCCGTCGA TGCGCTGCTC
GCGCAACGCG GCGCACCGAC GGTTGCGGCC GCAACCGACG GCCCGAAGGT GTCGTGGCTG
GACCTGTTCC GCTATCGCAC CGTGTGGGGG ATGATGATCG GCCTGTTCTG CCTGAACTTC
GCGATCTACT TCTTCATCAC GTGGTTCCCG AGCTACCTGC TGCAGTCGCG CGGCTTCTCG
CTCGCGTCGC TCGGCACGTG GGGCATGCTG CCCGCGCTGC TCGCGATTCC CGGCGGCTGG
CTCGGCGGCT ACGTGTCGGA CAGCCTGTTC CGCCGTGGCT GGAGCGCCAC CGCCGCGCGC
AAGACCTGTC TCGTGCTCGG CATGCTGCTG TCGTCGTCGA TCGCGCTGTC CGCGTTCGTG
GAAAACGTGT GGGCCTGCCT CGGCCTGTTC GCGCTCGCGT ATGCCAGCCT GTCGTTCGCC
GGCGCCAACG TGTGGACGCT GGTCGGCGAA GTCGCGCCGA CGCCCGCGCA CGTCGCCTCG
CTCGGCGGCA TCCAGAACTT CGCGGGCAAT CTCGCGGGCA TCTTCATCAC GACCTTCACC
GGCGTGATGC TGTCGCTCAC GAAAGGCTCG TTCGTGGTGC CGCTCGCGGT GGCCGGCGCG
CTGTGCGTGG TCGGTGCGCT GTCGTACCTG TTCGTGGTCG GCAAGGTCGA GCCGTTGCCG
CCGCTGCGGC GCGGCAGCAG CGCACGGAAT GTCGAACCGA ACGCGGCCTG A
 
Protein sequence
MPRIRWAMIL MCFLANVINF IDRANLAIAA PSIRADLGLD AVGMGLVLSA FFWTYAFLQL 
PAGWFIDKVG VRVSLALAVG WWSVFTVATG AARGLAQLVG VRLMLGVGEA AAIPSFAKVA
FNWFPRSERG LASSIFDSGS RVGSALSLPL VAWLISLVGW RGSFVITGGI GIVWALAWWF
VYRDPERYRA IAPDAVDALL AQRGAPTVAA ATDGPKVSWL DLFRYRTVWG MMIGLFCLNF
AIYFFITWFP SYLLQSRGFS LASLGTWGML PALLAIPGGW LGGYVSDSLF RRGWSATAAR
KTCLVLGMLL SSSIALSAFV ENVWACLGLF ALAYASLSFA GANVWTLVGE VAPTPAHVAS
LGGIQNFAGN LAGIFITTFT GVMLSLTKGS FVVPLAVAGA LCVVGALSYL FVVGKVEPLP
PLRRGSSARN VEPNAA