Gene Bcen_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3717 
Symbol 
ID4095025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp847092 
End bp847823 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID638017014 
Productextracellular solute-binding protein 
Protein accessionYP_623582 
Protein GI107026071 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.241075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCG ACCCATCCGT CATTCGCGCA CTCACACCCA CCGGCAAGCT GCGGGCATCG 
ATCAATCTCG GGAATCCCAT TCTCGCGGGC AAGGACGCAT CGGGCGAACC GGCCGGTGTG
TCGGTCGACC TGGCGCGCGC CTTTGCCGCA ACGCTCGGCG TGGCACTTGA ACTCGTGGTG
CTCGACGCAG CCGGCAAGTC CGTCCAGGCG GTCAGCGACG AGCGGGCAGA CATCGGCTTC
TTCGCCATCG ATCCACGACG AGGAGAAACC ATCGCGTTTA CCGATCCGTA CGTTTTGATC
GAAGGCTATT ACATGGTGCG CGATGAATCG TCGATTCGCG CCAACGACGA TGTCGACCAG
CCGTCGATCC GCGTGGCAGT TGGTGAGGGA AGCGCTTACG ATTTGTTCCT GACGCGCGAG
TTGAAGCATG CGCGGATCGT GCGGGCACCG ACGTCTCCGA CCGTCGTCCG GACGTTCCTC
GACGAGGGCC TGGAAGTCGC CGCCGGCGTC AAGCAACAGC TCGAGGCGGA CGCACGTCAA
GCGCCTGGCC TGCGTTTGCT CGACGAACGA TTCATGGTGA TCCGTCAGGC GATGGGTTTG
CCGAAAAGCC GCGGTGCGGC GGCAGCCGAC ACGTTGCGGG CCTTCGTCGA GGAAGCGAAG
GCATCCGGGT TCGTCGCCGA GGCACTCGCG CGGCACAAGA TTACCGGCGC GTCGGTCGCG
CCCGCTGCGT AG
 
Protein sequence
MKPDPSVIRA LTPTGKLRAS INLGNPILAG KDASGEPAGV SVDLARAFAA TLGVALELVV 
LDAAGKSVQA VSDERADIGF FAIDPRRGET IAFTDPYVLI EGYYMVRDES SIRANDDVDQ
PSIRVAVGEG SAYDLFLTRE LKHARIVRAP TSPTVVRTFL DEGLEVAAGV KQQLEADARQ
APGLRLLDER FMVIRQAMGL PKSRGAAAAD TLRAFVEEAK ASGFVAEALA RHKITGASVA
PAA