Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3526 |
Symbol | |
ID | 4095793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 650801 |
End bp | 651475 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638016825 |
Product | type III secretion system protein |
Protein accession | YP_623393 |
Protein GI | 107025882 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4790] Type III secretory pathway, component EscR |
TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.586711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAACC TGCCGAATCC GGTCGCGCTG ATCGCGGTGA TCGCCGCGCT CGGCATCGCG CCGTTCGCGG CGCTGATGGT GACGAGCTAC ACGAAACTCG TGGTCGTGCT CGGCCTGCTG CGCTCCGCGC TCGGCATCCA GCAGGTACCG CCGAACCTCG TGCTGAACGG CATCGCGCTG ATCCTGTCGC TGTTCATCAT GGCGCCTGTC GGGATGTCGA TCCGCGACGC GCTGCAGGCG CGCCACTTCG ATGCGTCGGG GCAGTTGTCG ACCTCGGACA TCGGCGCGCT CGCCGACGCG GCGCTGCCGC CGATCAAGGA TTTCCTCGTG TCGCATACGC GCCAGCGCGA CCGCGAATTC TTCGTGCGCA CCGCGACGTC GGTCTGGCCG AAGAACCGCG CGGACGGCAT CAAGGACGAC GACCTGCTCG TGCTGGTGCC GAGCTTCACG CTCGCCGAGC TGACGAAGGC GTTCCAGATC GGCTTCGTGA TCTACATCGT GTTCATCGTC GTCGACCTGC TGGTCGCGAA CATCCTGCTG GCGCTCGGGA TGCAGATGAT CTCGCCGACG ACGATCTCGG TGCCGTTCAA GCTGCTGCTG TTCGTCGCGC TCGACGGCTG GTCGCTGCTC GTGCACGGGC TCGTGCTGTC GTATCGGGTC GCCGGAGCCG GATGA
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Protein sequence | MGNLPNPVAL IAVIAALGIA PFAALMVTSY TKLVVVLGLL RSALGIQQVP PNLVLNGIAL ILSLFIMAPV GMSIRDALQA RHFDASGQLS TSDIGALADA ALPPIKDFLV SHTRQRDREF FVRTATSVWP KNRADGIKDD DLLVLVPSFT LAELTKAFQI GFVIYIVFIV VDLLVANILL ALGMQMISPT TISVPFKLLL FVALDGWSLL VHGLVLSYRV AGAG
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