Gene Bcen_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3163 
Symbol 
ID4095364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp219847 
End bp221076 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content65% 
IMG OID638016463 
Productmajor facilitator transporter 
Protein accessionYP_623032 
Protein GI107025521 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGACCC ACATCAACGA GACTCGCGTC ATGAACGTGT CGCTCGCCGT GAACTCCCGA 
GCCGCGCTCA TGCCGGCCGG GTTCCTTGCC CTCGGAACGT TCGCCATCGG CACCGAGGGC
TTTATGATTG CGCCGCTGCT GCCGGTCATG GCCAAGGACT TCGGTTTGCC GGTCCCGACC
GTTGCGGTGC TCGTCATCGT CTTCACCCTT GTGTTGGCGC TGTCATCACC GATCTCCACG
GTTGCCACCG GCCGGATGGC GCGCAAGTGG GTCTTGCTCG CAGCCATGTC GCTGTTCGCC
ATCGGCAACG TGACGGCGGC GGTGTCCGCA TCGTTCGCCT TGCTGATCGG AGCACGGGTA
TTGATGGCTA TCGCTGCAGG CCTGTATGTA CCAGCGGCCA ATGGGCTCGC CGGTGTCATC
GTGCCGCCGA GCATGCGAGG CCGCGCACTC GCCATCGTCA GCGCGGGCCA GACATTGGCC
ATCGCACTCG GACTGCCGCT AGGCGGGATG ATCGGTCACG CCTTCGGTTG GCGTGCGACC
TTTCTGCTGG TCGGCGCAAT GAGCGTCATC GCCATTGCGG GCATCTTCGC GGGTATTGCC
CGCGACGCCG GAGAGGGAGT TGCCGTGGCG AGCCTGCGCG AACGTGTGTC CGTGATCCGC
CAGGCTCCGA TTCAGCGCTT GCTTGGAGTC AGCCTGTTCT GGTCGATCGG CGCCTTTGCT
GCCTATCCGT ACATCGCGGA ATACCTGGAT GCCGTCCTTG CTTTCGGCCC GAATGCAATC
ACGGCGACGG TTTCTCTATG GGGGCTTTCT GCGGCAGCAG GGGTGATGAC TGGAGGTGTG
TTCAATGACC GCTTCGGGGC CAATCGGGTG GTGCACGGAT CGCTGATGCT GCTGGGCCTG
TCGTTCCTGG CGCTGGCTAT CGCCTCGCGT CTGCCGCCGC AGGTTGCCCT GGTTCCGGTG
CTTGTTGCAG TCGCTGTCTG GGGCTTTACT GTCTGGTCGT ACTTCCCGGC CCAGATGTCG
CGGCTCATCG CGGCCGGCGC GCCGGCGCAA GCGCCGGTTG CCCTCGCGCT CAATACGTCC
ACCATGTACT TCGGTTTTTC TGTCGGCAGT ACCTTGGGCG CCGCAGTGTT GAGCTCAGGC
GCTGTCTGGG GCATCGGAGC CGTGGCGGCG CTGGCCGAAC TGATCGCCTT GGCTCTCAAC
GCGGTCCTTA GCAGAAACGC CCGTGCCTGA
 
Protein sequence
MRTHINETRV MNVSLAVNSR AALMPAGFLA LGTFAIGTEG FMIAPLLPVM AKDFGLPVPT 
VAVLVIVFTL VLALSSPIST VATGRMARKW VLLAAMSLFA IGNVTAAVSA SFALLIGARV
LMAIAAGLYV PAANGLAGVI VPPSMRGRAL AIVSAGQTLA IALGLPLGGM IGHAFGWRAT
FLLVGAMSVI AIAGIFAGIA RDAGEGVAVA SLRERVSVIR QAPIQRLLGV SLFWSIGAFA
AYPYIAEYLD AVLAFGPNAI TATVSLWGLS AAAGVMTGGV FNDRFGANRV VHGSLMLLGL
SFLALAIASR LPPQVALVPV LVAVAVWGFT VWSYFPAQMS RLIAAGAPAQ APVALALNTS
TMYFGFSVGS TLGAAVLSSG AVWGIGAVAA LAELIALALN AVLSRNARA