Gene Bcen_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3158 
Symbol 
ID4095359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp214772 
End bp215506 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID638016458 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_623027 
Protein GI107025516 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGACT TCCATTCACA CCTTGACCTG TATCCCGATG GCCTCAAGCT TGCGCAGGAG 
GTGAACAGAA GGAACGAGTT TACCCTCGTG GTCACCACTA GTCCGCGCGC CTACCGGGCA
ACGTCGAATG TGTTTCTCGG TTTGAAGAAC ATCAAGGTGG GAATCGGCCT GCATCCGGAA
GTGGCTGCCG CCAAACAAGG AGAGCTGGGC GACCTTATTG AGGGAATCTC GCGAGCACGT
TTTGTTGGCG AGATTGGGAT GGATGGTTCC CCCAGATTTC GAGGCTCACT TTCTGTGCAG
GAGAGAGTCT TCCGAGCGGC CCTCGCTGAA TGCGGACGGT ACCAAGGAAA GGCGATGAGC
ATCCACTCGC GCGGTGCTGC ACGCCGAGTC GTGGAACTGC TGGCTACGAC GAAGCATGCC
GGCGTACCCG TGCTTCATTG GTTCTCGGGC GGGTTCGCTG AACTTGAGAC TGCTGTTCGC
ATTGGTTGTT GGTTCAGCGT TGGCCCTACG ATGCTCGAGG GTGAGAAGGG GCGGGCGCTG
GTGGCGCGAA TGCCTCTACA CCGAGTGCTA CCTGAAACGG ATGGTCCGTT TACGAGCGTG
GGCGGGATAC AACTGCAGCC GTGGGATGCA TGGTCCGTGC GAGCCCCTCT GGCGGCAATA
TGGGGCATGC AGGAAGATGA GGTAGGGGAG CAGATGAAGC AGAACCTTCA GCACTTGCTG
CGGCTATCAG GTTGA
 
Protein sequence
MIDFHSHLDL YPDGLKLAQE VNRRNEFTLV VTTSPRAYRA TSNVFLGLKN IKVGIGLHPE 
VAAAKQGELG DLIEGISRAR FVGEIGMDGS PRFRGSLSVQ ERVFRAALAE CGRYQGKAMS
IHSRGAARRV VELLATTKHA GVPVLHWFSG GFAELETAVR IGCWFSVGPT MLEGEKGRAL
VARMPLHRVL PETDGPFTSV GGIQLQPWDA WSVRAPLAAI WGMQEDEVGE QMKQNLQHLL
RLSG