Gene Bcen_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3143 
Symbol 
ID4095700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp189501 
End bp190166 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID638016443 
ProductOmpA/MotB 
Protein accessionYP_623012 
Protein GI107025501 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.356953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAAC TCGCTCTTGC GCTCGCGCTT TCCGCAACGG CCCTCGCCGC GTGCTCGACC 
GCATCCGGCC CGACCTTCAG CGCCTCCGAA CTGCAGCCGC GCGACGGCGT GCGCACCTTC 
CAGGTGGACT GCCACGGCCT GCTGTCCGGC CCGCAGACCT GCATGAAGGC CGCCCGCAAG 
ATCTGCGGCG ACGAGCCCGT GCGCGCCGTC GACTCGGCCC GCGCGCTGCG CGACAAATCC 
GATCCGGCCA CGCTGGTCTT CCAGTGCGGC GCCGCACCGG CCGAAGCGGC TTCGGCCGCC 
ACACCCGCAC CCGCCGCCGT GATCGAACGC GTGAACCTGT CCGGCGACGC ACTGTTCGCC 
ACCGACCACG CGACGCTCGC ACCGACCGCG CGCGAATCGC TGGACCGGCT GCTGAGCGAG 
CGCGCCGACC GCACGTATTC GCAAGTGACG GTCACCGGCT TCACCGACTC GGTGGGCAGC 
GACGACTACA ACCTCGCGCT GTCGAAGCGC CGCGCCGAAT CGGTCGCCGC CTATCTGAAG 
GCGCACGGGC TGAAGACCGA CTCGATCACC GTGTCGGGCC GCGGCAAGGC CGATCCGGTC 
GCGTCCAACG CGACGCCGGA AGGCCGCGCC AGCAACCGCC GCGTCGAAAT CCGGCTGCAG 
CACTGA
 
Protein sequence
MNKLALALAL SATALAACST ASGPTFSASE LQPRDGVRTF QVDCHGLLSG PQTCMKAARK 
ICGDEPVRAV DSARALRDKS DPATLVFQCG AAPAEAASAA TPAPAAVIER VNLSGDALFA 
TDHATLAPTA RESLDRLLSE RADRTYSQVT VTGFTDSVGS DDYNLALSKR RAESVAAYLK 
AHGLKTDSIT VSGRGKADPV ASNATPEGRA SNRRVEIRLQ H