Gene Bcen_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3086 
Symbol 
ID4095995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp116420 
End bp117040 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID638016386 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_622955 
Protein GI107025444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCA CGCATTTGCT GTTGATTTAT CTCGCCGCGC TGGCGGCCAT TTACGCGGTA 
CCGGGGCCCG ACATGGCGCT CGTGCTGCAG ACCAGCATCG GCCGCGGCGT GCGGCCGGGG 
ATGGCGGCGG CGGCCGGCCT GTCGCTCGCG CGCACCGTGC ACGTGACGCT GTCGGCATGC 
GGCGTCGCGG CGTTGATCCG CAGCGCGCCG TGGCTCTACG AGGTGATCCG CTATGGCGGC 
GCGCTTTATC TCGCGTATGT CGCGATCCAG GTGTTCCGCT CGCCGGTGTT CGCGCTTGGC 
GACGGCGACG CGCCGGCGGG CGCGTTGCGC CAGTCCTTCG TGAAGGGACT GCTGACCAAC 
CTGCTGAACC CGAAGGCGCT GCTGTTCTGC TCGGTGCTGC TGCCGCAGTT CGTGCGGCCC 
GAGGTCGGGC CGGTCGTCTG GCAGATGTTC GAGCTCGGCG CGCTGCTGGT GGCGGCCGGC 
GTGTGCTTCG ACCTCGCGTG CGTGTTCGGC GCGTCGCGCA TCGCGGCGTG GATGCGCGCG 
CATCCGCTCG CGCAGACGGT GCAGCGCTGG ACCTTTTCCG CGGCGTTGAT CGGTTTTGCG 
CTGCGGTTGT CGATGGACTG A
 
Protein sequence
MISTHLLLIY LAALAAIYAV PGPDMALVLQ TSIGRGVRPG MAAAAGLSLA RTVHVTLSAC 
GVAALIRSAP WLYEVIRYGG ALYLAYVAIQ VFRSPVFALG DGDAPAGALR QSFVKGLLTN 
LLNPKALLFC SVLLPQFVRP EVGPVVWQMF ELGALLVAAG VCFDLACVFG ASRIAAWMRA 
HPLAQTVQRW TFSAALIGFA LRLSMD