Gene Bcen_3068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3068 
Symbol 
ID4096122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp90115 
End bp91218 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content71% 
IMG OID638016363 
ProductABC transporter related 
Protein accessionYP_622937 
Protein GI107025426 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR03258] 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.128785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGG TGGACACCAC CCTGACCCAT CCCGGCGCAT TCGGCGCCGC CGAACCGCAC 
GCGACGCTGC GGTCCGGCGC GCCGGGCGGC GTGCAGATCG AGCATCTGAG CGTGCGCTAC 
GGCGCACGCA CGGTGCTGGA AGATCTGTCG CTGTCGATCG GCGCCGGTGA ATTTCTGACC 
GTGCTCGGCA AGAGCGGCTG CGGCAAGACC ACGCTGCTGC GCTTCATCGC CGGGTTCGTG 
AAGGCCGACG GCCTGACCGG CACGCTGACC GTGGCCGGAC GCGACCTGAC CCATGCGCCG 
CCGCACAAGC GCAATCTCGG TCTGCTGTTC CAGAATTACG CGCTGTTTCC GCACCTGTCG 
GTGTTCGAGA ACGTCGCATT CGGGCTGCGC GCACGCGGCA TGGCGTCGTC GGAAGTGACG 
CGCCGCGTCG CCGATGCGCT CAAGCTCGTG CAGCTCGGCG ATGCCGGCCA CCATCTGCCG 
GCGCAACTGT CGGGCGGGAT GCAGCAACGC GTCGCGCTGG CCCGCGCGCT CGTGATCGAG 
CCCGACGTGC TGCTGCTCGA CGAGCCGCTG TCGGCGCTCG ACGCCAACCT GCGCGCGTCG 
GTGCGCAGCG AACTGAAGGC GCTGCACGAG CGCCTGCCGA ACCTGACCGT CGTCTGCGTG 
ACGCACGACC GCGACGATGC GCTCGTGCTG TCCGACCGCG CGCTGTTGAT GCGCGACGGC 
CACATCGCGC AGCTCGGCAC GCCGCAACAG TTGTACGACG CGCCGCGGGA CGGCTACGTC 
GCGCGCTATC TCGGCCCGGC GAACCTGCTG CCGCCGCACG TGATCTTTCC GCTCGGCGAT 
CCGCGCCACG AGGTGCGCGG CAAGGTCGCG TGCGTGCGCC CCGAGCGCCT CACCGTGATG 
CCGCCCGCGG CGGGCGGCCT GCACGGCACC GTGTCGTCGG TCGAATGGCA GGGCGCGGAT 
CTGTCGATCG CGGTCGTGAT CGACGCGGCG CCCGACGAGC CCGTGCGCGT CACGATGCAA 
CGCGGCCGCG GCGTGGCCCC CGAGCGCGGT GCGCGCGTGT CCCTGCATTG CGAGGCAGAC 
GATGTCGTCC TTATCGAGCC CTGA
 
Protein sequence
MNPVDTTLTH PGAFGAAEPH ATLRSGAPGG VQIEHLSVRY GARTVLEDLS LSIGAGEFLT 
VLGKSGCGKT TLLRFIAGFV KADGLTGTLT VAGRDLTHAP PHKRNLGLLF QNYALFPHLS 
VFENVAFGLR ARGMASSEVT RRVADALKLV QLGDAGHHLP AQLSGGMQQR VALARALVIE 
PDVLLLDEPL SALDANLRAS VRSELKALHE RLPNLTVVCV THDRDDALVL SDRALLMRDG 
HIAQLGTPQQ LYDAPRDGYV ARYLGPANLL PPHVIFPLGD PRHEVRGKVA CVRPERLTVM 
PPAAGGLHGT VSSVEWQGAD LSIAVVIDAA PDEPVRVTMQ RGRGVAPERG ARVSLHCEAD 
DVVLIEP