Gene Bcen_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2035 
Symbol 
ID4091274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2248318 
End bp2248914 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content72% 
IMG OID638015314 
Producthypothetical protein 
Protein accessionYP_621909 
Protein GI107023582 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAG CCTTTTCCGT TTCCCTGTTC CGTCGCGTTG CCGCCGATCT GCGGCACGCG 
AACCGGCCGT CGTCGCGCTG GCGGCTGGCC GGCTTCACGC TGATCGAACT GATGATCGTG
CTGGCGATCG TCGGGGTCGT CGCGGCCTAT GCGATTCCCG CGTACCAGGA TTACCTCGCG
CGCTCGCGCG TCGGCGAGGG GCTGGCGCTC GCGTCGTCCG CGCGGCTCGC GGTCGCCGAC
AACGCCGCGA GCGGCGCGAG CCTCGACGGC GGCTACAGCC CGCCGGCCGG GACCCGCAAC
GTCGAATCGG TCGCGATCGA CGGCGCCACC GGCCAGATCA CGGTTTCCTT CACCACCCGC
GTCGCCGCGG CCGGCACCAA TACGCTGGTG CTCGTGCCGT CCGCGCCCGA CAAGGCCGAG
GCGCCCACCG CGCGCGTGCC GCTCAAAAAG GGCGCGATAC AAGCGGGCGC GATCGCGTGG
GAATGCTTCG CGGCCGGCAA GGACGCGTCG TCGCTGCCGG CGCCTGGAGC GGGGCCGTTG
CCGGGTAACG CCGCGACGCT GCCCGCGAAA TATGCGCCCG CGGAGTGCCG CGCATAA
 
Protein sequence
MFEAFSVSLF RRVAADLRHA NRPSSRWRLA GFTLIELMIV LAIVGVVAAY AIPAYQDYLA 
RSRVGEGLAL ASSARLAVAD NAASGASLDG GYSPPAGTRN VESVAIDGAT GQITVSFTTR
VAAAGTNTLV LVPSAPDKAE APTARVPLKK GAIQAGAIAW ECFAAGKDAS SLPAPGAGPL
PGNAATLPAK YAPAECRA