Gene Bcen_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2030 
Symbol 
ID4091269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2241574 
End bp2242740 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content64% 
IMG OID638015309 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_621904 
Protein GI107023577 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0965849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGG GTTGGGAAAC AATTTCGACA AACTTCATGC GGAACGACAC GCCGTATGGC 
GGCGGCAACT TCCGCATCAA GGGCAACGAC GTGATGAGCG TCAAGCTGGC CAATCCCGTG
GTGACGTTCA AGCCCACGGC TGAATCGACG GAACCGCAGC GGCCCGAGCC GACCGAAGCA
TGGATGAACG ACACGGGCGA GTTGCTGAAC CGCATGACGA TCAGCTTCTT CCGCGGAACC
ATCGACGGCG GGATGAAACG CCAGTTCCAG CAGGTCGGCC AGAACGCCGC GTGGTGGTAC
TCCCCGGACT GGTCGGTTCA GTTCCTCAGC ACCTCATGGA TGGACTACAA GGCCCCGGAG
GCACGCGGCG GCGATGCACC GCAAACCACG AAGCTGTGGA AGTCGCTCGA CGGCGGCCAA
ACGTGGTCTC AACTGCAATG GCCCGAAAAC CAGAACATTG GCCGGTTGCT CTTCGTCGAT
CCACAGCGCG GCTACGCGAT CGGCTGGGGG CCGAGAGTGT GGCGGACCGC GGACGGCGGT
AACACGTGGC AGACGATCGA CGTGCCGACC GATGCACGCG TCGCCGACGA GACGCGCAAG
AATTTCAATG CGGTGAGTCT CGGCCCTGAC GGTGTACTGC GCGTCGCCTA CTCCGCCGCT
CGGACTGCAG AGGCGCCGTC GCACAGTGTG ATCGACCGGC TCGACTGGGA GCGGCACGCA
TTCGTGACGG AGACCGAACT GCCGGGCCAG GTCGTCACCG CGCTCGATAC CACGCCGGGA
CCGGCAGCAC ACTATTCGCT GTACGCGCTG TCACGTCTCG ACAAGCCGCA AAGCGGCGAG
AGTCGCGACA ACAGCCGCCG GGCGGGCGCG ATTTCCACGT GGACGAACGA CCATCCCGAG
TCCGTGCACC AACTGCGCAC GTTCGACGAG ACGCTCCGGC TCGACAGCCT GAGCGTCGGT
CGTAACGGCC TCCTGCTCGT CTACGCGACC GACCCGAACT CCGGCAGTCG CGGCGGTGCC
CCGATCGACC TGACGTTCAC CAGTACCGAC GCCGGCAAGT CGTGGGATCA AACAGCCGAC
AAGGTTGCAC AAGGCGGCTA CTTCGACGCG CAGACCAACA CGCTGTACTG GCTGCACGCT
TATACGCTGA AGAAGCGGAC TTTCTGA
 
Protein sequence
MATGWETIST NFMRNDTPYG GGNFRIKGND VMSVKLANPV VTFKPTAEST EPQRPEPTEA 
WMNDTGELLN RMTISFFRGT IDGGMKRQFQ QVGQNAAWWY SPDWSVQFLS TSWMDYKAPE
ARGGDAPQTT KLWKSLDGGQ TWSQLQWPEN QNIGRLLFVD PQRGYAIGWG PRVWRTADGG
NTWQTIDVPT DARVADETRK NFNAVSLGPD GVLRVAYSAA RTAEAPSHSV IDRLDWERHA
FVTETELPGQ VVTALDTTPG PAAHYSLYAL SRLDKPQSGE SRDNSRRAGA ISTWTNDHPE
SVHQLRTFDE TLRLDSLSVG RNGLLLVYAT DPNSGSRGGA PIDLTFTSTD AGKSWDQTAD
KVAQGGYFDA QTNTLYWLHA YTLKKRTF