Gene Bcen_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1788 
Symbol 
ID4092103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1976544 
End bp1977809 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content72% 
IMG OID638015068 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_621664 
Protein GI107023337 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAAC CCATTGATTC ACTGTTCGGG CGGCTGGCGC TGCTCGTCGT CGGTGTCCTG 
CTCCTGTCGC ACTTCGCGTG GTTCTTCGCG ATGCGGCTCG AGCGCAACCA GATGCAGACG
CGTTATGCGG TCGAGGAAGC CGCATTCCTC GTCGACGCGG TGCGCCAGCA CATCGAGCGT
ACGCCCGACC AGCCGTTGCC GTCGCGCGTG CGGCTCGTGT CGCCCGATAG TGCCGATGTG
CCGAAGAGCG GCGATTCGGG GCTGCCGCCG CCGCTGAAGC GGTTCCGCGA CGACGTGAGC
GAGCGCATGC CGCCCGGCAC GCAGGTCGAG ATCGGCACGC CCGGCCATCC GCCGGTGCTG
TGGGTGAAGG AGCCGACCGA CCGCAACTGG ATCGTGGTGC CCGTGCAGCC GCTGCGGCCG
CCGCGCTCGC TCGACCGGAT GCTGCTGTGG CTCGGCACGA TCTTCTCGGC CGGCGTGATC
GCCGCGCTGT TCGCGGCCTG GCAGTTGCAG CAGCCGCTGC GCTCGCTCGC GCGCGCGGTC
GCGCGTTTCG GTCGCGGGCA GCCGGTGCCG CCGCTGCGCG AGCGCGGCCC GCGCGAGCTG
CGCCAGCTCA CGCACGGCTT CAACCAGATG GTGGAGCAGG TGTCGCAGGC CGAGAGCGAT
CGCGCGGTGA TGCTGGCCGG CGTCGCGCAC GACCTGCGCA CGCCGCTCGC GCGGATGCGC
CTGCGGGCCG AAATGATGGA CGACGCACGG CTGCGCGACG GCGTCGTGCG CGACGTCGAC
TCGATGTCGC ACATCGTCGA CCAGTTCCTG GTGTTTGCGC ACGGCGGGGC CGACCGCAGC
GAGCCGGTGC CGGTCGACCA GGCGTGCGAG CGGATCGCGC GTAGCTATCG TGCGGTTGCG
CCGAATGCGC CGACGGTCCA GACGCGGCTG GAGGCCGATC CCGGCTTCCG GCTGCCGACG
GCGACGCTCG ACCGGATCTT GTCGAACCTG CTGGACAACG CGCATGCGTA CGGTGCACCG
CCCGTATTCG TCGAGACGGC GCGCACGCCG GCCGGCTACG TGCTGTCGGT CAGCGACAGC
GGCGGCGGCA TCGCGCCGCG CGACCTCGCG GCCGCCACGC GGCCGTTCGT GCGGCTCGAT
CCCGCGCGCG GCGGGAACGG CCACAGCGGG CTCGGGCTCG CGATCGTCGA GCGGCTCGTG
CTCAGGCTGG GGGGGGCGCG TGCGACATCG GCAATCGCCC CGAGGGCGGC CTGCGGGTAT
CGATGA
 
Protein sequence
MRKPIDSLFG RLALLVVGVL LLSHFAWFFA MRLERNQMQT RYAVEEAAFL VDAVRQHIER 
TPDQPLPSRV RLVSPDSADV PKSGDSGLPP PLKRFRDDVS ERMPPGTQVE IGTPGHPPVL
WVKEPTDRNW IVVPVQPLRP PRSLDRMLLW LGTIFSAGVI AALFAAWQLQ QPLRSLARAV
ARFGRGQPVP PLRERGPREL RQLTHGFNQM VEQVSQAESD RAVMLAGVAH DLRTPLARMR
LRAEMMDDAR LRDGVVRDVD SMSHIVDQFL VFAHGGADRS EPVPVDQACE RIARSYRAVA
PNAPTVQTRL EADPGFRLPT ATLDRILSNL LDNAHAYGAP PVFVETARTP AGYVLSVSDS
GGGIAPRDLA AATRPFVRLD PARGGNGHSG LGLAIVERLV LRLGGARATS AIAPRAACGY
R