Gene Bcen_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1655 
Symbol 
ID4093525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp1836317 
End bp1836880 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID638014934 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_621532 
Protein GI107023205 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAG ACAAGGAACT CGCCGACTTT CTGGCGGGCG TCGAAAGGCG CGCGTTCAAG 
CAGGCTGCGT ACGCCGTGCG TGACGACGAT GCGTCGCTCG ACATCGTGCA GGACGCGATG 
ATCAAGCTCG CGGAAAAGTA CGGCGACCGG CCGTCGGCCG AGCTGCCGCT GCTTTTTCAG 
CGGATCCTGC AGAACGCGAT CCACGACTGG TTCCGCCGGC AGAAGGTCCG CAATACGTGG 
GTGACGCTCT TCTCGTCGCT GAACAACACC GACGACGACG ACTTCGACCC GCTCGAAACA 
CTCGAATCCG CGGACGACAA CGCGGGCGTC GAGAGCAGCG AGCACCGCCT CGAACGAGAG 
CAGGTTCTGG CCCTGATCGA CGAAGAAATC CAGAAACTTC CGGCGCGTCA ACGGGAAGCG 
TTCCTGATGC GTTATTGGGA AGATATGGAT GTCGCCGAGA CTGCCGCCGC AATGGGGTGC 
TCCGAGGGCA GCGTCAAGAC GCACTGCTCA CGAGCCACTC ATACCCTGGC GCAAGCGCTC 
AAGGCCAAAG GAATCACGCT ATGA
 
Protein sequence
MASDKELADF LAGVERRAFK QAAYAVRDDD ASLDIVQDAM IKLAEKYGDR PSAELPLLFQ 
RILQNAIHDW FRRQKVRNTW VTLFSSLNNT DDDDFDPLET LESADDNAGV ESSEHRLERE 
QVLALIDEEI QKLPARQREA FLMRYWEDMD VAETAAAMGC SEGSVKTHCS RATHTLAQAL 
KAKGITL