Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1468 |
Symbol | |
ID | 4091984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1626600 |
End bp | 1628036 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638014743 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_621347 |
Protein GI | 107023020 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00759632 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGCG TCTTCGCCCT GCTCGCCGCG AGCCTGCTGG CCGCGTGCTC GATCGCGCCG CAGCCGCTCG CGCCCGTCCC GGTCGAAACC GACCGGTTCC GTCATGCCGA TCCGGCGACC GATGCGCACG CACCGTCGCT CGCCGCGTGG CCGGCGTGGT TCGGTGACTC GCAACTCGGC CGCCTCGTCG ACGCCGCACT CGCGCACAAC CTCGACATCC GCGCGGCGGC CGCGCGCGTC GACCAGGCGC AGGCGCTGCT CGGCGTGCGC GAAGCCGCGC TGGCGCCGAC CGTGCGCGTC GACCCGTCGT TCAGCCGCAC GCGGGTGTCC GGCACGGTCG ACAACGCGCT GCCGAAGCGC ACGATGCACA ACTGGTCGGT GCCCGTCGCC GCGAGCTACG AAGTCGATCT ATGGGGCCGC TTGCGCGGCG ATGCCGACGT CGGCGAACAG AACCTGCTGC AGGCGGCGGC CGATCGCGAT GCGGTGCGTC TGCGGGTGGC GACCGAAGTG GCCGTCGACT ACCTGACGCT GCGCTACGTC GACGACGATC TCGTGACGCT CGTGCGCGCG ATCGGGCTGC GGCGCACCGC GCTCGACGTG ATCGCCGCCC GCGTGCGGGC CGGCGCGGCG AGCGATCTCG ACGGGCTGCG CGCGTCGGCC GATCTCGATA CCGCGCATGC CGATCTCGCG GAAAGCCGCC GGCTGCGCGA GAACCTCGTC GACGCCCTCG CGGTGCTGAC CGGCGTGTCG CCGACCGCGT TCGACGTCGA TACCGGCGCC GTGCCCGTGC AGGTGCCGGA GGTGCCGGCC GGATTGCCGT CCGCGCTGCT CGCCCAACGC CCGGACGTAT TCGCGGCGGC ACGGCGCGCC GATGCGGCGT CGCTCGAGCT GGGCATCGCG CGCACCGCGT GGCTGCCGAC GCTGACGCTG ACCGCCGACG GCGGTTTCGC CACCCGCGAC CTGCGCTCGT TTCTCGACCG CAACAGCTCG CTGTGGAGTC TCGGCGCGAA CGTCGCGCTG ACGCTGTTCG ACGGCGGCAA GCGCGATGCC GCGGTGGCCG CCGCGCGAGC CGGCACGAAC GTCGCCGACG CCGACTATCG CGCGACCGCG ATCGGTGCGT TGCGCGACGT GCAGGACGCG CTCAACGACA TCGCCGCGCA AAAGGAACGG ATCGTGCGCT ACGACAGTGC GGCGCGCGCG ACGGACGCGG CGGCGCGGCT ATCGCTGAGC CGCTACGCGC ACGGTTACGT CAGCTACCTG GAAGTGATCG ACGCCGATCG CGACGCACTG AATGCGCGGC GCCAGCTGAT TCACAGCCGG CAGGCGCTGG CCGTCGCGAC GGTGAGCCTC GTGCGTGCGT TGGGCGGCGG GTGGACGCCG CCGGCGCACG CCGGCCGGGG CGGGTTGCGC GACGCGACGC AAGCCGACGC GCGATGA
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Protein sequence | MTRVFALLAA SLLAACSIAP QPLAPVPVET DRFRHADPAT DAHAPSLAAW PAWFGDSQLG RLVDAALAHN LDIRAAAARV DQAQALLGVR EAALAPTVRV DPSFSRTRVS GTVDNALPKR TMHNWSVPVA ASYEVDLWGR LRGDADVGEQ NLLQAAADRD AVRLRVATEV AVDYLTLRYV DDDLVTLVRA IGLRRTALDV IAARVRAGAA SDLDGLRASA DLDTAHADLA ESRRLRENLV DALAVLTGVS PTAFDVDTGA VPVQVPEVPA GLPSALLAQR PDVFAAARRA DAASLELGIA RTAWLPTLTL TADGGFATRD LRSFLDRNSS LWSLGANVAL TLFDGGKRDA AVAAARAGTN VADADYRATA IGALRDVQDA LNDIAAQKER IVRYDSAARA TDAAARLSLS RYAHGYVSYL EVIDADRDAL NARRQLIHSR QALAVATVSL VRALGGGWTP PAHAGRGGLR DATQADAR
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