| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1333 |
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| Symbol | |
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| ID | 4091428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 1470463 |
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| End bp | 1472580 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638014608 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_621212 |
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| Protein GI | 107022885 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0242466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCG CCCTGCCCGA CCGTCTCGAA CCCGGCCGCA GCTATCCGCT CGGCGCCAGT
TGGGACGGCC TCGGGACCAA CTTCGCGGTA TTTTCCGCGC ACGCGCAGCG CATCCAGCTG
TGCGTGTTCG ACCCGACCGG CCGCAAGGAA CTCGCGCGCC TCGACCTGCC CGAATGCACC
GACGAGGTGT GGCACGGCTA CCTGCCCAAC GCGCATCCGG GCACCGTGTA CGGGTTCCGC
GCGGACGGCC CGTACCAGCC GCAGCACGGC CATCGCTTCA ATCCGACCAA GCTGCTGCTC
GACCCGTACG CGCGCAAGCT GGTCGGCCAG TTCCGCTGGT CGGACGCACT GTTCGGCTAT
CGCGTGCATT CGAACCGGGC CGACCTGTCG ATGGACCGCC GCGATTCGGC CCCCGCGATG
CCGAAAGCGG TGGTCGTCGA CGAAGCGTTC GACTGGAGCA ACGACCGCCG CCCGAACGTG
CCGTGGCGCA GCACCGTGAT CTACGAGACC CACGTGCGCG GCGCGTCGAT GCGCCGCGCC
GGGCTGCGCC CGCCGGAGCG CGGCACGTTC GCGTCGCTCG CGCATCCGGC GTTCATCGAT
CACCTGCTGT CGATCGGCGT GACGACGGTC GAGCTGCTGC CGATTCACGC GTTCCTGCAG
CAGCGCGAAC TCGTGAAACG CGGGCTGCGC AATTACTGGG GCTACGACAC GGCCGCGTTC
TTCGCGCCGG AGCCGTCGTA CCTGACGACG CGGCGGCTCG ACGAAATGCG CATCGCGGTG
CGCCAGCTGC ATGCGGCCGG CATCGAGGTC GTGCTCGACG TGGTCTACAA CCACACGTGC
GAAGGCAACC AGCTCGGGCC CACGCTGTCG TGGCGCGGCC TCGACAACGC GAGCTATTAC
CGGCTGCGGC CCGACGATCC GCGCTACCAC GTCGACGAAA CCGGCTGCGG CAACACGCTG
AACATGTCGC ATCCGCGCGT CGTGCAGATG GTGATGGATT CGCTGCGCTA CTGGGCGACC
GCGTTCAACA TCGACGGCTT CCGCTTCGAT CTCGGCGTGA CGCTCGGCCG CGAGGATCAC
GGCTTCGAGC CCGGCGCCGG GTTCTTCGAT GCGCTGCGGC AGGACCCCGT GCTCGCGCAG
CGCAAGCTGA TCACCGAGCC GTGGGATCTC GGCCCCGGCG GCTATCAGCT CGGCCGCCAC
CCGCCCGGCT TCGCCGAATG GAACGACCGG TTTCGCGACA CCGTGCGGCG TTTCTGGCGC
GGCGACGCGG GGCAGCGCCC GGAACTGGCC GCGCGGCTGT CGGGCTCGGC CGACCTGTTC
AATCACGGGC GGCGCCGCAC GTGGGCCTCG ATCAATTTCG TGACCGCGCA CGACGGCTTC
ACGCTGGCCG ACCTCGTGGC GTATGCGGGC AAGCACAACG ACGCGAACGG CGAGGACAAC
CGCGACGGCC GCGACGACAA CTGCAGCGCG AACTGGGGCG TCGAAGGGCC GACCGACGAC
ACGGCGATCC GCGACGTGCG GCTGCGCGTC GCCCGCTCGA TGCTCGCGAC GCTGTTTACC
GCGCTCGGCA CGCCGATGCT CGTGGCCGGC GACGAATTCG GCCGCACGCA GCACGGCAAC
AACAACGCGT ATTGCCAGGA TAACGAACTG TCGTGGCTCG ACTGGGATCT CGCGCACAGC
GACGCCGGCG TGCAGATGAC CCGCTTCGTG TCGCGGCTCG CCGCGCTGCG GCGCATGTAT
CCGGTGATGT CGGCGCCGCG CTACCCGTCG GGCGACCGCG ACGGCGCGCC GGGCATGCGC
GAGATCGACT GGTTCGACGA ACGCGGCGAC GCGCTCACCG TGCCCGCCTG GGAAGACGGC
GAACGCCGCG CATTGACGAT GCGGCGCGTC GGCACCGGCC GCACCGGGCG CACCGAAGCG
TTGCTCGTGA TGCTGAACGC ATCGGCCGAC ACCATCACGT TCATACCGCC CGCGCCCGTG
CTCGATTACC GCATCCTGCT CGACACTGCG ACGCCCGACT CGGGCCCGCG CTCGTGGCCG
GAAGCGGGGC TCGACGTCGC CGCGCATGCG GCCGTGATCG CGGTCGCGGC CGTGCCGCCG
CCAGATCAGT CTTCCTGA
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| Protein sequence | MPTALPDRLE PGRSYPLGAS WDGLGTNFAV FSAHAQRIQL CVFDPTGRKE LARLDLPECT
DEVWHGYLPN AHPGTVYGFR ADGPYQPQHG HRFNPTKLLL DPYARKLVGQ FRWSDALFGY
RVHSNRADLS MDRRDSAPAM PKAVVVDEAF DWSNDRRPNV PWRSTVIYET HVRGASMRRA
GLRPPERGTF ASLAHPAFID HLLSIGVTTV ELLPIHAFLQ QRELVKRGLR NYWGYDTAAF
FAPEPSYLTT RRLDEMRIAV RQLHAAGIEV VLDVVYNHTC EGNQLGPTLS WRGLDNASYY
RLRPDDPRYH VDETGCGNTL NMSHPRVVQM VMDSLRYWAT AFNIDGFRFD LGVTLGREDH
GFEPGAGFFD ALRQDPVLAQ RKLITEPWDL GPGGYQLGRH PPGFAEWNDR FRDTVRRFWR
GDAGQRPELA ARLSGSADLF NHGRRRTWAS INFVTAHDGF TLADLVAYAG KHNDANGEDN
RDGRDDNCSA NWGVEGPTDD TAIRDVRLRV ARSMLATLFT ALGTPMLVAG DEFGRTQHGN
NNAYCQDNEL SWLDWDLAHS DAGVQMTRFV SRLAALRRMY PVMSAPRYPS GDRDGAPGMR
EIDWFDERGD ALTVPAWEDG ERRALTMRRV GTGRTGRTEA LLVMLNASAD TITFIPPAPV
LDYRILLDTA TPDSGPRSWP EAGLDVAAHA AVIAVAAVPP PDQSS
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