Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1261 |
Symbol | |
ID | 4090874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1388661 |
End bp | 1389395 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638014536 |
Product | amino acid ABC transporter permease |
Protein accession | YP_621140 |
Protein GI | 107022813 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.127261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCGG ACGATTCGCT GCTCGCGTTG CTCGCCTTCG GCGACGGCGG TTATGGCCGC GTGTTCGCGG GTGCGTTCGC GCTGACGTTC GGCGTCGCGG CCGCGTCGTT CTGCACCGGC GTGCTGCTCG GCATCGCCGG CGCGCTCGGC AAGCTGTCGC GATACGCGGC GTTCGTGTGG CTGGCGCGGC TCTACACGAT GCTCGTGCGC GCGCTGCCGG AGTTGTTGTG CCTGCTGCTC GCGTTCTACG CGGTCGCACC GGCCATCGAG AACGCGCTGC ACGGCAGCGG CATCGTTTCC GGCGACTTCG CGTTCGACCC GTTCGTCGTC GCCGCGCTAT CGCTCGGTTT CATCCAGGGC GCGTATCTCA CCGACATCTT CCGCGCGGCG CTCGCCAACG TGCCGGTCGG CCAGATCGAA GCCGCGCACG CGTACGGGAT GACGCCCTGG CAGACGTTCA CGCGCATCCG GCTCCCGGCC GCGGCGCGGC TCGCGCTGCC GGGCGTCGGC AACGTGTGGC TGAACGCGAC CAAGGACGCG TCGTTCATCA GCGTGCTCGG ATCGTTCACG GATCTGCTGA AGGCGAGCCA GCTCGCGGCC GGTGCGACGC GGCACTACGT ATTCTTCTAT CTGGTCACGG CCGCGCTGTT CCTGCTGCTG AGCATCACGT CGACCGGCAT TTTCGCGGCG CTGGAGCGGC ATGCGAATCG CGGCACGAGG CGCGCGACGA CATGA
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Protein sequence | MAADDSLLAL LAFGDGGYGR VFAGAFALTF GVAAASFCTG VLLGIAGALG KLSRYAAFVW LARLYTMLVR ALPELLCLLL AFYAVAPAIE NALHGSGIVS GDFAFDPFVV AALSLGFIQG AYLTDIFRAA LANVPVGQIE AAHAYGMTPW QTFTRIRLPA AARLALPGVG NVWLNATKDA SFISVLGSFT DLLKASQLAA GATRHYVFFY LVTAALFLLL SITSTGIFAA LERHANRGTR RATT
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