Gene Bcen_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1261 
Symbol 
ID4090874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1388661 
End bp1389395 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID638014536 
Productamino acid ABC transporter permease 
Protein accessionYP_621140 
Protein GI107022813 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGG ACGATTCGCT GCTCGCGTTG CTCGCCTTCG GCGACGGCGG TTATGGCCGC 
GTGTTCGCGG GTGCGTTCGC GCTGACGTTC GGCGTCGCGG CCGCGTCGTT CTGCACCGGC
GTGCTGCTCG GCATCGCCGG CGCGCTCGGC AAGCTGTCGC GATACGCGGC GTTCGTGTGG
CTGGCGCGGC TCTACACGAT GCTCGTGCGC GCGCTGCCGG AGTTGTTGTG CCTGCTGCTC
GCGTTCTACG CGGTCGCACC GGCCATCGAG AACGCGCTGC ACGGCAGCGG CATCGTTTCC
GGCGACTTCG CGTTCGACCC GTTCGTCGTC GCCGCGCTAT CGCTCGGTTT CATCCAGGGC
GCGTATCTCA CCGACATCTT CCGCGCGGCG CTCGCCAACG TGCCGGTCGG CCAGATCGAA
GCCGCGCACG CGTACGGGAT GACGCCCTGG CAGACGTTCA CGCGCATCCG GCTCCCGGCC
GCGGCGCGGC TCGCGCTGCC GGGCGTCGGC AACGTGTGGC TGAACGCGAC CAAGGACGCG
TCGTTCATCA GCGTGCTCGG ATCGTTCACG GATCTGCTGA AGGCGAGCCA GCTCGCGGCC
GGTGCGACGC GGCACTACGT ATTCTTCTAT CTGGTCACGG CCGCGCTGTT CCTGCTGCTG
AGCATCACGT CGACCGGCAT TTTCGCGGCG CTGGAGCGGC ATGCGAATCG CGGCACGAGG
CGCGCGACGA CATGA
 
Protein sequence
MAADDSLLAL LAFGDGGYGR VFAGAFALTF GVAAASFCTG VLLGIAGALG KLSRYAAFVW 
LARLYTMLVR ALPELLCLLL AFYAVAPAIE NALHGSGIVS GDFAFDPFVV AALSLGFIQG
AYLTDIFRAA LANVPVGQIE AAHAYGMTPW QTFTRIRLPA AARLALPGVG NVWLNATKDA
SFISVLGSFT DLLKASQLAA GATRHYVFFY LVTAALFLLL SITSTGIFAA LERHANRGTR
RATT