Gene Bcen_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1117 
Symbol 
ID4093777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1213395 
End bp1213892 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content60% 
IMG OID638014393 
Producthypothetical protein 
Protein accessionYP_620997 
Protein GI107022670 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGCT ACAACAAGAT TTTGCTGTGT TACGACGGCA CGCTCGAAGG GCGCAAGGCG 
CTGCGTTACG GGGCCAATCT CGCAATGGAC CTGAAGGCCG AAACGCATTT GCTGTCGGTC
GTCGACATGC GTTCGAGCAT TGCGCAAAGT GCAGGTTTGC TGACCGATGT CGCATGCGGA
CGCTTCGAGG AAACCGCGCG CGAAATCCTG CAGGAAGGCG TGAATTGGCT GCGCGAGCGC
GGCGTGCAGG CCGAAGGCCA TTTCGCATTC GGTTATCCGA TCGACGAAAT CGCGAATCTC
GCGTCGGAAT TGAAGGTCGA TCTCGTCGTC GTCGGCCACC GGTGCCGCAG CGGATTGTCG
AGATGGTGGA TGGGGTCGGG CAATACGCAA CTGCTCGATC GCGTGAACTG CAGCATCCTG
GTTGCGTGTT CGTCGGCGGA AGAGCAGAAG GCCGAAATTG CGCGCGAGCG TGAAGCGGCC
ATCGCGAACG GCCAATGA
 
Protein sequence
MASYNKILLC YDGTLEGRKA LRYGANLAMD LKAETHLLSV VDMRSSIAQS AGLLTDVACG 
RFEETAREIL QEGVNWLRER GVQAEGHFAF GYPIDEIANL ASELKVDLVV VGHRCRSGLS
RWWMGSGNTQ LLDRVNCSIL VACSSAEEQK AEIAREREAA IANGQ